RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CLEC4GQ6UXB4 293 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 FUKQ8N0W3 1084 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 OR56A1Q8NGH5 318 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 RBM15Q96T37 977 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMC2-205ENST00000493955 SLC25A32Q9H2D1 315 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 SMOC2Q9H3U7 446 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 MLXIPQ9HAP2 919 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 TMOD4Q9NZQ9 345 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 CTTNBP2NLQ9P2B4 639 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 KIF17Q9P2E2 1029 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 HSFX1Q9UBD0 423 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 NEU2Q9Y3R4 380 aa7.14□□□□□ -1.27
SMC2-205ENST00000493955 LEFTY2O00292 366 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 PCDH17O14917 1159 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 EPB41L2O43491 1005 aaKnown RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 RGS10O43665 173 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 SRGAP2O75044 1071 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 USP1O94782 785 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 ACTL6BO94805 426 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 KCNA2P16389 499 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 ITGALP20701 1170 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 KCNA3P22001 575 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 CST5P28325 142 aaPredicted RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 RABGGTBP53611 331 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 ALDH18A1P54886 795 aaKnown RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 HHEXQ03014 270 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 MYO1EQ12965 1108 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 INTS11Q5TA45 600 aaKnown RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 MANEALQ5VSG8 457 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 WDR78Q5VTH9 848 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 NAIF1Q69YI7 327 aaPredicted RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 TCTN3Q6NUS6 607 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 TMEM108Q6UXF1 575 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 PPHLN1Q8NEY8 458 aaKnown RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 FAM227BQ96M60 508 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 PYM1Q9BRP8 204 aaKnown RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 TP63Q9H3D4 680 aaPredicted RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 HELLSQ9NRZ9 838 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 ZFR2Q9UPR6 939 aaKnown RBP7.13□□□□□ -1.27
SMC2-205ENST00000493955 AATKQ6ZMQ8 1374 aa7.13□□□□□ -1.27
SMC2-205ENST00000493955 A0A1B0GTW7 788 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 HMX3A6NHT5 357 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 E7ENX8 843 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 TOR1BO14657 336 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 FAM155BO75949 473 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 SUN1O94901 812 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 FGFR4P22455 802 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 PNLIPRP1P54315 467 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 PRKAG1P54619 331 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 TAP2Q03519 686 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 GPS1Q13098 491 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 DDX10Q13206 875 aaKnown RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 CNGB1Q14028 1251 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 SIM2Q14190 667 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 ANKRD45Q5TZF3 282 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 HTR3DQ70Z44 454 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 POLNQ7Z5Q5 900 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 RASGRP3Q8IV61 690 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 CCDC117Q8IWD4 279 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 FTSJ3Q8IY81 847 aaKnown RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 GSPT2Q8IYD1 628 aaKnown RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 SPARTQ8N0X7 666 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 OR1N1Q8NGS0 311 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 ZNF483Q8TF39 744 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 PPP2R3CQ969Q6 453 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 ZNF668Q96K58 619 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 RTKNQ9BST9 563 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 PTDSS2Q9BVG9 487 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 PABPC3Q9H361 631 aaKnown RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 CXorf36Q9H7Y0 433 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 PRDM8Q9NQV8 689 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 CRYL1Q9Y2S2 319 aa7.12□□□□□ -1.27
SMC2-205ENST00000493955 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 USP15Q9Y4E8 981 aaPredicted RBP7.12□□□□□ -1.27
SMC2-205ENST00000493955 OR2W5A6NFC9 320 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 CAPN14A8MX76 684 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 DIRC3C9JPN6 131 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 hCG_1984214I3L0E3 225 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 J3KRW8 73 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 CCNT2O60583 730 aaKnown RBP7.11□□□□□ -1.27
SMC2-205ENST00000493955 NTSR2O95665 410 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 VIPP01282 170 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 ARP10275 920 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 CKMT1AP12532 417 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 GYS1P13807 737 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 PPIFP30405 207 aaKnown RBP7.11□□□□□ -1.27
SMC2-205ENST00000493955 APOBEC3AP31941 199 aaPredicted RBP7.11□□□□□ -1.27
SMC2-205ENST00000493955 ADD2P35612 726 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 GEMIN4P57678 1058 aaKnown RBP7.11□□□□□ -1.27
SMC2-205ENST00000493955 AP2B1P63010 937 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 HSD11B2P80365 405 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 MC2RQ01718 297 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 FOXR2Q6PJQ5 311 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 TMPRSS9Q7Z410 1059 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 PCGF5Q86SE9 256 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 LRRTM4Q86VH4 590 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 C2CD5Q86YS7 1000 aa7.11□□□□□ -1.27
SMC2-205ENST00000493955 SLC44A2Q8IWA5 706 aaPredicted RBP7.11□□□□□ -1.27
SMC2-205ENST00000493955 SYT8Q8NBV8 401 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms