RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ERMP1Q7Z2K6 904 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 CMTM8Q8IZV2 173 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 GUF1Q8N442 669 aaKnown RBP13.47□□□□□ -0.25
HSPG2-212ENST00000493940 OR6B3Q8NGW1 331 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 GOLGA5Q8TBA6 731 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 MYCBPAPQ8TBZ2 947 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 TMC2Q8TDI7 906 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 DEPDC1BQ8WUY9 529 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 DNASE1L2Q92874 299 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 IRF7Q92985 503 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 SHDQ96IW2 340 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 MYRFLQ96LU7 910 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 ZNF518BQ9C0D4 1074 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 VRTNQ9H8Y1 702 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 APOBEC3GQ9HC16 384 aaKnown RBP13.47□□□□□ -0.25
HSPG2-212ENST00000493940 TRPV5Q9NQA5 729 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 MAGEC2Q9UBF1 373 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-212ENST00000493940 HMGXB4Q9UGU5 601 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 NDRG2Q9UN36 371 aaKnown RBP13.47□□□□□ -0.25
HSPG2-212ENST00000493940 R4GN57 208 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 GPR179Q6PRD1 2367 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 DMXL1Q9Y485 3027 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 SDK1Q7Z5N4 2213 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 GVINP1Q7Z2Y8 2422 aa13.47□□□□□ -0.25
HSPG2-212ENST00000493940 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 C2orf78A6NCI8 922 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 CHADO15335 359 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 PHACTR2O75167 634 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 SP9P0CG40 484 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 CSH1P0DML2 217 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 CSH2P0DML3 217 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 RFX1P22670 979 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 NR2F2P24468 414 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 CCNE1P24864 410 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 CDC25CP30307 473 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 ATICP31939 592 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 MAGEA11P43364 429 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 MCCD1P59942 119 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-212ENST00000493940 BIRC3Q13489 604 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 TRPC3Q13507 836 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 NFIL3Q16649 462 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 NAIF1Q69YI7 327 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-212ENST00000493940 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 TSSK4Q6SA08 328 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 MON1AQ86VX9 555 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 C1orf210Q8IVY1 113 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 SPATA20Q8TB22 786 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 TRMT2BQ96GJ1 504 aaKnown RBP13.46□□□□□ -0.25
HSPG2-212ENST00000493940 FUBP3Q96I24 572 aaKnown RBP eCLIP13.46□□□□□ -0.25
HSPG2-212ENST00000493940 KCNK16Q96T55 309 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 OSBPL6Q9BZF3 934 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 SNX25Q9H3E2 840 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 HPS4Q9NQG7 708 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 GKN1Q9NS71 199 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 C2orf42Q9NWW7 574 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 GCNT4Q9P109 453 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 PIAS3Q9Y6X2 628 aa13.46□□□□□ -0.25
HSPG2-212ENST00000493940 A8MXQ7 604 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 F8VP50 259 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 BEST1O76090 585 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 HLA-DRAP01903 254 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 CD44P16070 742 aaKnown RBP13.45□□□□□ -0.26
HSPG2-212ENST00000493940 GCLMP48507 274 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 PGFP49763 221 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 VAMP7P51809 220 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
HSPG2-212ENST00000493940 TNNC1P63316 161 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 NUCB2P80303 420 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 ADAM9Q13443 819 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 TAF12Q16514 161 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 ZNF699Q32M78 642 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 ARHGAP15Q53QZ3 475 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 ISM2Q6H9L7 571 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 ZNF852Q6ZMS4 543 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 ADSSL1Q8N142 457 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 B3GALNT2Q8NCR0 500 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 BPIFB1Q8TDL5 484 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 TAS1R2Q8TE23 839 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 FAM3CQ92520 227 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 SEMA4DQ92854 862 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 SYAP1Q96A49 352 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-212ENST00000493940 SPATA17Q96L03 361 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 TWNKQ96RR1 684 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 FAM83CQ9BQN1 747 aa13.45□□□□□ -0.26
HSPG2-212ENST00000493940 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
HSPG2-212ENST00000493940 R3HCC1Q9Y3T6 440 aaKnown RBP13.45□□□□□ -0.26
HSPG2-212ENST00000493940 SPAG17Q6Q759 2223 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 TRIM49BA6NDI0 452 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 CALUO43852 315 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-212ENST00000493940 FGF19O95750 216 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ASS1P00966 412 aaKnown RBP13.44□□□□□ -0.26
HSPG2-212ENST00000493940 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 CHRNB1P11230 501 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ARSAP15289 507 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 BMP6P22004 513 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 GRIK1P39086 918 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ASPAP45381 313 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 ID4P47928 161 aa13.44□□□□□ -0.26
HSPG2-212ENST00000493940 MTAPQ13126 283 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms