RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 TRIM8Q9BZR9 551 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 ADAMTS10Q9H324 1103 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 EURLQ9NYK6 297 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 CXXC1Q9P0U4 656 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 CRNNQ9UBG3 495 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 PADI3Q9ULW8 664 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 A0A087X0B3 334 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 LRRIQ4A6NIV6 560 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 HNRNPCL2B2RXH8 293 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 EIF3HO15372 352 aaKnown RBP eCLIP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 HNRNPCL1O60812 293 aaKnown RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 KRT18P05783 430 aaKnown RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 GLRA2P23416 452 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 HPDP32754 393 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 SLC12A3P55017 1021 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 CAPSQ13938 189 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 IKBKEQ14164 716 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 MXD4Q14582 209 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 KRT71Q3SY84 523 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 RINT1Q6NUQ1 792 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 APBB2Q92870 758 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 PEX13Q92968 403 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 RNF25Q96BH1 459 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 VPS50Q96JG6 964 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 GCOM2Q9BZD3 368 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-222ENST00000493919 NDEL1Q9GZM8 345 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 PLEKHA4Q9H4M7 779 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 CFL2Q9Y281 166 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 MICAL3Q7RTP6 2002 aa12.19□□□□□ -0.46
BRCA1-222ENST00000493919 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-222ENST00000493919 NPHP3-ACAD11A0A0J9YXS1 232 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 LRRC72A6NJI9 287 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 N4BP3O15049 544 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 CBFA2T3O75081 653 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 DARSP14868 501 aaKnown RBP12.18□□□□□ -0.46
BRCA1-222ENST00000493919 ZNF16P17020 682 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-222ENST00000493919 ARL2P36404 184 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 ETFBP38117 255 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 PHKA2P46019 1235 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 IRAK1P51617 712 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 CDC42EP1Q00587 391 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 XRCC4Q13426 336 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 TFDP1Q14186 410 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 ACCSLQ4AC99 568 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 BCAS4Q8TDM0 211 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 HERVK_113Q902F9 699 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 GFM2Q969S9 779 aaKnown RBP12.18□□□□□ -0.46
BRCA1-222ENST00000493919 DHX58Q96C10 678 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 ZNF570Q96NI8 536 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 HGH1Q9BTY7 390 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 MIS12Q9H081 205 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 VCXQ9H320 206 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.18□□□□□ -0.46
BRCA1-222ENST00000493919 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 ST3GAL5Q9UNP4 418 aa12.18□□□□□ -0.46
BRCA1-222ENST00000493919 DPPA5A6NC42 116 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 HOXB1P14653 301 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 PTPN2P17706 415 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 SFPQP23246 707 aaKnown RBP eCLIP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 PRKAR1BP31321 381 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 HAAOP46952 286 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 WDR5P61964 334 aaKnown RBP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 TCEAL1Q15170 157 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 ARL13BQ3SXY8 428 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 RESP18Q5W5W9 173 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 ZNF600Q6ZNG1 722 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 RSRC2Q7L4I2 434 aaKnown RBP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 STKLD1Q8NE28 680 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 BSNDQ8WZ55 320 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 CCDC113Q9H0I3 377 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 PFDN4Q9NQP4 134 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 A0A1B0GVL5 298 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 INO80B-WBP1J3KQ70 363 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 GPR182O15218 404 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 POLR2DO15514 142 aaKnown RBP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 ANP32DO95626 131 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 IL32P24001 234 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 POLE2P56282 527 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 DEFB103AP81534 67 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 MAPRE2Q15555 327 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 SIGIRRQ6IA17 410 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 KLC3Q6P597 504 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 C1orf186Q6ZWK4 172 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 CATSPER4Q7RTX7 472 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 MDM1Q8TC05 714 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 TMC2Q8TDI7 906 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 IFT74Q96LB3 600 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 TUBGCP5Q96RT8 1024 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 KIFC3Q9BVG8 833 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 ERVK-5Q9HDB9 667 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 MTRF1LQ9UGC7 380 aaKnown RBP12.17□□□□□ -0.46
BRCA1-222ENST00000493919 L3MBTL1Q9Y468 752 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 PRKAB1Q9Y478 270 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 SNX5Q9Y5X3 404 aa12.17□□□□□ -0.46
BRCA1-222ENST00000493919 MYH11P35749 1972 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms