RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 TRIML1Q8N9V2 468 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 CCDC150Q8NCX0 1101 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 SHDQ96IW2 340 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 C8orf48Q96LL4 319 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 B3GNT5Q9BYG0 378 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 NIF3L1Q9GZT8 377 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 TBC1D17Q9HA65 648 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 CYP3A43Q9HB55 503 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 OBP2AQ9NY56 170 aa24.1■■□□□ 1.45
SNIP1-203ENST00000493916 BIN1O00499 593 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 TADA3O75528 432 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 ANXA13P27216 316 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 STARD6P59095 220 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 PRKCQQ04759 706 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 INCA1Q0VD86 236 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 SLC44A4Q53GD3 710 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 FBXL13Q8NEE6 735 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 NELFBQ8WX92 580 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 RSPRY1Q96DX4 576 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 FAXDC2Q96IV6 333 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 DUSP9Q99956 384 aaKnown RBP24.09■■□□□ 1.45
SNIP1-203ENST00000493916 SLC46A2Q9BY10 475 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 ZNF518BQ9C0D4 1074 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 TRPV5Q9NQA5 729 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 KIAA1468Q9P260 1216 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 ARMCX3Q9UH62 379 aaPredicted RBP24.09■■□□□ 1.45
SNIP1-203ENST00000493916 OBSL1O75147 1896 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 ATP8B3O60423 1300 aa24.09■■□□□ 1.45
SNIP1-203ENST00000493916 COL4A2P08572 1712 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 MUC6Q6W4X9 2439 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 BICDL2A1A5D9 508 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 RFX1P22670 979 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 NDST1P52848 882 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 FCHO2Q0JRZ9 810 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 DCAF17Q5H9S7 520 aaPredicted RBP24.08■■□□□ 1.45
SNIP1-203ENST00000493916 KLHL10Q6JEL2 608 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 CRYBG2Q8N1P7 616 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 PRSS33Q8NF86 280 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 MRPS31Q92665 395 aaKnown RBP24.08■■□□□ 1.45
SNIP1-203ENST00000493916 IRF7Q92985 503 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 DDX23Q9BUQ8 820 aaKnown RBP24.08■■□□□ 1.45
SNIP1-203ENST00000493916 BRD9Q9H8M2 597 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 METTL14Q9HCE5 456 aaKnown RBP24.08■■□□□ 1.45
SNIP1-203ENST00000493916 EHD2Q9NZN4 543 aa24.08■■□□□ 1.45
SNIP1-203ENST00000493916 F8VP50 259 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 PRAMEF12O95522 483 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 GDI1P31150 447 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 TCERG1LQ5VWI1 586 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 DENND5BQ6ZUT9 1274 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 FRMD5Q7Z6J6 570 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 FILIP1Q7Z7B0 1213 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 MON1AQ86VX9 555 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 CMTM8Q8IZV2 173 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 SEMA4DQ92854 862 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 SLC35C1Q96A29 364 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 TTLL2Q9BWV7 592 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.07■■□□□ 1.44
SNIP1-203ENST00000493916 TMEM30AQ9NV96 361 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 RAB20Q9NX57 234 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 HMGXB4Q9UGU5 601 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 CTNND2Q9UQB3 1225 aa24.07■■□□□ 1.44
SNIP1-203ENST00000493916 DENND4CQ5VZ89 1909 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 CLDN5O00501 218 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 PI15O43692 258 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 CACNA2D1P54289 1103 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 PAK1Q13153 545 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 CAMK4Q16566 473 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 CBWD6Q4V339 395 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 CBWD3Q5JTY5 395 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 CBWD5Q5RIA9 395 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 ACOT1Q86TX2 421 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 FAM35AQ86V20 835 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 COQ4Q9Y3A0 265 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 GREB1Q4ZG55 1949 aa24.06■■□□□ 1.44
SNIP1-203ENST00000493916 ARNTLO00327 626 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 STK25O00506 426 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 DPYSL4O14531 572 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 ZNF263O14978 683 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 CHADO15335 359 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 GALR2O43603 387 aaPredicted RBP24.05■■□□□ 1.44
SNIP1-203ENST00000493916 LRRN2O75325 713 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 AVPR1AP37288 418 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 PLA2G5P39877 138 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 TXNDC8Q6A555 127 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 PAQR9Q6ZVX9 377 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 FUKQ8N0W3 1084 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 MAB21L3Q8N8X9 362 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 SMARCD1Q96GM5 515 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 LRRC3BQ96PB8 259 aa24.05■■□□□ 1.44
SNIP1-203ENST00000493916 FAM124BQ9H5Z6 455 aaPredicted RBP24.05■■□□□ 1.44
SNIP1-203ENST00000493916 KANSL1LA0AUZ9 987 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 CILPO75339 1184 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 TRIM21P19474 475 aaKnown RBP24.04■■□□□ 1.44
SNIP1-203ENST00000493916 PTPN5P54829 565 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 USP46P62068 366 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 ZNF268Q14587 947 aaPredicted RBP24.04■■□□□ 1.44
SNIP1-203ENST00000493916 YAF2Q8IY57 180 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 TTC39CQ8N584 583 aa24.04■■□□□ 1.44
SNIP1-203ENST00000493916 CELF5Q8N6W0 485 aaKnown RBP24.04■■□□□ 1.44
SNIP1-203ENST00000493916 PJA1Q8NG27 643 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms