RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 DENND5BQ6ZUT9 1274 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 FAM35AQ86V20 835 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 IRF2BP1Q8IU81 584 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 CRYBG2Q8N1P7 616 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 NEK11Q8NG66 645 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 SLC2A14Q8TDB8 520 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 SLC39A7Q92504 469 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 SUSD6Q92537 303 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 PSMG2Q969U7 264 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 JAKMIP2Q96AA8 810 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 ZNF707Q96C28 371 aaPredicted RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 SLITRK1Q96PX8 696 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 SPAG5Q96R06 1193 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 MED15Q96RN5 788 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 LPIN3Q9BQK8 851 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 LSM14BQ9BX40 385 aaKnown RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 GPR88Q9GZN0 384 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 SDCBP2Q9H190 292 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 ATXN3LQ9H3M9 355 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 CBX8Q9HC52 389 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 DMAP1Q9NPF5 467 aaPredicted RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 CRTAC1Q9NQ79 661 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 KRT82Q9NSB4 513 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 TMLHEQ9NVH6 421 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 LIMA1Q9UHB6 759 aaKnown RBP8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 ZMYM5Q9UJ78 669 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 USTQ9Y2C2 406 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 DAAM1Q9Y4D1 1078 aa8.63□□□□□ -1.03
TM4SF1-204ENST00000493348 NCOR1O75376 2440 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 DENND4AQ7Z401 1863 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 MYO16Q9Y6X6 1858 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 MYO10Q9HD67 2058 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 SLC38A8A6NNN8 435 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 F8VP50 259 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 DPYSL4O14531 572 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 CBFA2T2O43439 604 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 ABL1P00519 1130 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 PAEPP09466 180 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 C7P10643 843 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 VDRP11473 427 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 BMP1P13497 986 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 CCDC130P13994 396 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 SLC9A1P19634 815 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 PON1P27169 355 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 GABRR2P28476 465 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 PDE6CP51160 858 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 BPIFB4P59827 614 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 PLCB2Q00722 1185 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 PTK2Q05397 1052 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 SYCP1Q15431 976 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 MTSS1LQ765P7 747 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 CACNA2D4Q7Z3S7 1137 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 DNAJB7Q7Z6W7 309 aaPredicted RBP8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 FMNL3Q8IVF7 1028 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 DHX40Q8IX18 779 aaKnown RBP8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 GJD3Q8N144 294 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 RBBP8NLQ8NC74 664 aaPredicted RBP8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 GPR152Q8TDT2 470 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 ING5Q8WYH8 240 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 MRPS31Q92665 395 aaKnown RBP8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 SPATA17Q96L03 361 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 C8orf48Q96LL4 319 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 ARID3AQ99856 593 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 B3GNT5Q9BYG0 378 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 FBXO44Q9H4M3 255 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 HCFC1R1Q9NWW0 138 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 TRPM5Q9NZQ8 1165 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 CEP72Q9P209 647 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 DNMT3BQ9UBC3 853 aaKnown RBP8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 DNAJC12Q9UKB3 198 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 CEP83Q9Y592 693 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 XIRP2A4UGR9 3374 aa8.62□□□□□ -1.03
TM4SF1-204ENST00000493348 UNC80Q8N2C7 3258 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 GREB1Q4ZG55 1949 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 DENND4CQ5VZ89 1909 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 LGALS16A8MUM7 142 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 CLDN5O00501 218 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 THAP12O43422 761 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 LRRN2O75325 713 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 CCDC172P0C7W6 258 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 DDX6P26196 483 aaKnown RBP eCLIP8.61□□□□□ -1.033e-11■■□□□ 12.7
TM4SF1-204ENST00000493348 YWHAQP27348 245 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 GNA15P30679 374 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 AVPR1AP37288 418 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 PPP3CCP48454 512 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 BCAT1P54687 386 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 RAD23BP54727 409 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 MAP3K7CLP57077 242 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 SNX16P57768 344 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 NTHL1P78549 312 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 MIIPQ5JXC2 388 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 SDHAF4Q5VUM1 108 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 PHLDB3Q6NSJ2 640 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 LUZP1Q86V48 1076 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 ARHGEF19Q8IW93 802 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 HS6ST3Q8IZP7 471 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 NUP93Q8N1F7 819 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 TTC9BQ8N6N2 239 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 C12orf29Q8N999 325 aa8.61□□□□□ -1.03
TM4SF1-204ENST00000493348 SLC4A11Q8NBS3 891 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms