RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SMOC2Q9H3U7 446 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 SLITRK6Q9H5Y7 841 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 IL21Q9HBE4 155 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 SLC2A4RGQ9NR83 387 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 PATJQ8NI35 1801 aa11.34□□□□□ -0.59
CDC42SE1-206ENST00000492796 TECTAO75443 2155 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 SLC38A8A6NNN8 435 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 NARSO43776 548 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 FCARP24071 287 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 TBXAS1P24557 533 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 ERCC5P28715 1186 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 WEE1P30291 646 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 YWHAEP62258 255 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 DPCR1Q3MIW9 517 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 SDHAF4Q5VUM1 108 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 POTEHQ6S545 545 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 RBM43Q6ZSC3 357 aaKnown RBP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 DENND5BQ6ZUT9 1274 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 ACOT1Q86TX2 421 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 FAM35AQ86V20 835 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 GPR152Q8TDT2 470 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 DEPDC1BQ8WUY9 529 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 SMARCD1Q96GM5 515 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 KXD1Q9BQD3 176 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 B3GNT5Q9BYG0 378 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZNF518BQ9C0D4 1074 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 TASP1Q9H6P5 420 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZFP14Q9HCL3 533 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 WNT16Q9UBV4 365 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 HMGXB4Q9UGU5 601 aa11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 MAGED2Q9UNF1 606 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDC42SE1-206ENST00000492796 F8VP50 259 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 LRRN2O75325 713 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 AFPP02771 609 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 F11P03951 625 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 CD58P19256 250 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 CYP4F8P98187 520 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 PFKPQ01813 784 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 CUL2Q13617 745 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 TPD52L1Q16890 204 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 GPR158Q5T848 1215 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 TANGO2Q6ICL3 276 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 HFE2Q6ZVN8 426 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 TMEM150AQ86TG1 271 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 FAM114A1Q8IWE2 563 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 MRPS31Q92665 395 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 PBXIP1Q96AQ6 731 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 CNOT6LQ96LI5 555 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZSWIM3Q96MP5 696 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 MED15Q96RN5 788 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 TWNKQ96RR1 684 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 MED10Q9BTT4 135 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 RPP25Q9BUL9 199 aaKnown RBP11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 TTLL2Q9BWV7 592 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 DMAP1Q9NPF5 467 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 KRT82Q9NSB4 513 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 CISHQ9NSE2 258 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 OBP2AQ9NY56 170 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 FBXL21Q9UKT6 434 aa11.32□□□□□ -0.6
CDC42SE1-206ENST00000492796 ZNF638Q14966 1978 aaKnown RBP11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 CLDN5O00501 218 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 TADA3O75528 432 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 RTN3O95197 1032 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 CFHP08603 1231 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 CCDC130P13994 396 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 PFKLP17858 780 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 PSMC3P17980 439 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 PPP3CCP48454 512 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 ORC1Q13415 861 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 STXBP5Q5T5C0 1151 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 CCDC183Q5T5S1 534 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 PAQR9Q6ZVX9 377 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 MFSD6LQ8IWD5 586 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 SUGP1Q8IWZ8 645 aaKnown RBP11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 FUKQ8N0W3 1084 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 FBXL6Q8N531 539 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 STKLD1Q8NE28 680 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 SLC2A14Q8TDB8 520 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 WHAMMQ8TF30 809 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 DNASE1L2Q92874 299 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 THAP9Q9H5L6 903 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 KIF9Q9HAQ2 790 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 CSNK1G1Q9HCP0 422 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 FAM49BQ9NUQ9 324 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 COL4A2P08572 1712 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 KMT2EQ8IZD2 1858 aa11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 KIF26AQ9ULI4 1882 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE1-206ENST00000492796 HEPACAM2A8MVW5 462 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 DPYSL4O14531 572 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 AP1G2O75843 785 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 FAM200BP0CF97 657 aa11.3□□□□□ -0.6
CDC42SE1-206ENST00000492796 PRKCSHP14314 528 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms