RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 YBX1P67809 324 aaKnown RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 CCDC93Q567U6 631 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 GALNT15Q8N3T1 639 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 MAFAQ8NHW3 353 aaPredicted RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 MDM1Q8TC05 714 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 IFI44Q8TCB0 444 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 SLC7A6OSQ96CW6 309 aaPredicted RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 PYM1Q9BRP8 204 aaKnown RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 STK33Q9BYT3 514 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 MS4A7Q9GZW8 240 aaPredicted RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 TMEM168Q9H0V1 697 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 MRPL46Q9H2W6 279 aaKnown RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 ATP6V0A4Q9HBG4 840 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 OBP2BQ9NPH6 170 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 RLIMQ9NVW2 624 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 KIF17Q9P2E2 1029 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 THEGQ9P2T0 379 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 PLEKHM1Q9Y4G2 1056 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 ACTL7AQ9Y615 435 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 A0A1B0GUL6 1792 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 MBD3L4A6NDZ8 208 aaPredicted RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 MBD3L3A6NE82 208 aaPredicted RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 M0R3H8 397 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 GCP02774 474 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 GRPP07492 148 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 RNASE1P07998 156 aaKnown RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 KLRC1P26715 233 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 CLNS1AP54105 237 aaKnown RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 RAP2BP61225 183 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 SP140Q13342 867 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 SLC29A2Q14542 456 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 PCOLCEQ15113 449 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 PFKFB4Q16877 469 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 INSCQ1MX18 579 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 RINLQ6ZS11 566 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ZSWIM9Q86XI8 627 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 DTX1Q86Y01 620 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 TRMT2AQ8IZ69 625 aaKnown RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 ADGRG2Q8IZP9 1017 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 UBXN10Q96LJ8 280 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ZCWPW1Q9H0M4 648 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 OR10A2Q9H208 303 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 COG5Q9UP83 839 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 AFG3L2Q9Y4W6 797 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 PCDHGB3Q9Y5G1 929 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 EDC4Q6P2E9 1401 aaKnown RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 A0A1W2PPC4 97 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 MYO1FO00160 1098 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 TMEM127O75204 238 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 RPS6KA4O75676 772 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ANXA1P04083 346 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 TPH1P17752 444 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 SREBF1P36956 1147 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ANTXR2P58335 489 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 PSMC1P62191 440 aaKnown RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 NKAPLQ5M9Q1 402 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 FAM124AQ86V42 546 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 FNIP1Q8TF40 1166 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 SPSB4Q96A44 273 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 C11orf84Q9BUA3 381 aaPredicted RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 TRIM54Q9BYV2 358 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 CLCA2Q9UQC9 943 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 CCDC196A0A1B0GTZ2 297 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 TRIM43BA6NCK2 446 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 HMX3A6NHT5 357 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ZNF785A8K8V0 405 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 F2RL2O00254 374 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 PIP5K1BO14986 540 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 RGS10O43665 173 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 HAUS5O94927 633 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 CYP2C9P11712 490 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 HDCP19113 662 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 IL13P35225 146 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 KIR2DL3P43628 341 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ITGA8P53708 1063 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 RRADP55042 308 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 KRT17Q04695 432 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 TAF5Q15542 800 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 OTUD7BQ6GQQ9 843 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 USP17L6PQ6QN14 398 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 SLC15A4Q8N697 577 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ZFP28Q8NHY6 868 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 HDAC2Q92769 488 aaKnown RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 TRIM43Q96BQ3 446 aaPredicted RBP3.47□□□□□ -1.85
SNX13-209ENST00000492626 SHISA4Q96DD7 197 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ASB2Q96Q27 587 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 CNPPD1Q9BV87 410 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ING3Q9NXR8 418 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 MYO1AQ9UBC5 1043 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 PCDH11XQ9BZA7 1347 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 PCDH11YQ9BZA8 1340 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 ALPK3Q96L96 1907 aa3.47□□□□□ -1.85
SNX13-209ENST00000492626 MANSC4A6NHS7 340 aaPredicted RBP3.46□□□□□ -1.85
SNX13-209ENST00000492626 J3KRW8 73 aa3.46□□□□□ -1.85
SNX13-209ENST00000492626 SYT5O00445 386 aa3.46□□□□□ -1.85
SNX13-209ENST00000492626 ACKR2O00590 384 aa3.46□□□□□ -1.85
SNX13-209ENST00000492626 CCNT2O60583 730 aaKnown RBP3.46□□□□□ -1.85
SNX13-209ENST00000492626 UNC5CO95185 931 aa3.46□□□□□ -1.85
SNX13-209ENST00000492626 FLT3LGP49771 235 aa3.46□□□□□ -1.85
SNX13-209ENST00000492626 GZMKP49863 264 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms