RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 POLRMTO00411 1230 aaKnown RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 VPS4BO75351 444 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 SPDEFO95238 335 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 IL18RAPO95256 599 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 FOSP01100 380 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 GNAI2P04899 355 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 IFIT2P09913 472 aaKnown RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 KCNA2P16389 499 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 RPL17P18621 184 aaKnown RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 VIPR2P41587 438 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 CACNA2D1P54289 1103 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 CXADRP78310 365 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 SIM1P81133 766 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 IFIT5Q13325 482 aaKnown RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 EZH2Q15910 746 aaKnown RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 CYP2A13Q16696 494 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZIK1Q3SY52 487 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZNF425Q6IV72 752 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZDHHC24Q6UX98 284 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 SKAP1Q86WV1 359 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 SLC15A4Q8N697 577 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 AOPEPQ8N6M6 819 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 KIAA1191Q96A73 305 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 FUBP1Q96AE4 644 aaKnown RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZC3H10Q96K80 434 aaKnown RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 CCDC138Q96M89 665 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 SLC46A1Q96NT5 459 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 MYD88Q99836 296 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 GDF15Q99988 308 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 MESP1Q9BRJ9 268 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 GJB4Q9NTQ9 266 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 SLC17A6Q9P2U8 582 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 KCNE5Q9UJ90 142 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 SNX13Q9Y5W8 968 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 FPGT-TNNI3KV9GXZ4 949 aa3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 COL11A2P13942 1736 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P30-201ENST00000492455 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 CCDC195A0A1B0GUA6 201 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 MBD3L4A6NDZ8 208 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 MBD3L3A6NE82 208 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 LRRC3CA6NJW4 275 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 PYCARD-AS1I3L0S3 204 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 FOXN3O00409 490 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 GPANK1O95872 356 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 MT-ND5P03915 603 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 PTGER1P34995 402 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 IL6STP40189 918 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 STT3AP46977 705 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 RARRES1P49788 294 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 MRPS35P82673 323 aaKnown RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZNF844Q08AG5 666 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 RESTQ13127 1097 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 BIRC2Q13490 618 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 PMS2P11Q13670 270 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 MORC3Q14149 939 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 SRSF7Q16629 238 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 GEN1Q17RS7 908 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 SPDYE7PQ495Y7 208 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 KLHL22Q53GT1 634 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 FAM209BQ5JX69 171 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 AKNAD1Q5T1N1 836 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 LMBRD2Q68DH5 695 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 HIBCHQ6NVY1 386 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 SLC30A10Q6XR72 485 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 PTF1AQ7RTS3 328 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 DPP9Q86TI2 863 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 GAS2L3Q86XJ1 694 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZNF280BQ86YH2 543 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 FAM109AQ8N4B1 249 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 DEPTORQ8TB45 409 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 ZBTB9Q96C00 473 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 MED15Q96RN5 788 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 SMOQ99835 787 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 COLEC11Q9BWP8 271 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 CHST8Q9H2A9 424 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 NLRC4Q9NPP4 1024 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 A1CFQ9NQ94 594 aaKnown RBP3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 TMEM74BQ9NUR3 256 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 TMX2Q9Y320 296 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 DAAM1Q9Y4D1 1078 aa3.55□□□□□ -1.84
HMGB1P30-201ENST00000492455 PRAMEF33A0A0G2JMD5 474 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 ABHD14A-ACY1A0A1B0GW23 586 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 TBC1D4O60343 1298 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 PRAMEF10O60809 474 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 CDKL5O76039 1030 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 LDHAP00338 332 aaKnown RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 PARP1P09874 1014 aaKnown RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 TXNP10599 105 aaKnown RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 FGFR2P21802 821 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 KLRC1P26715 233 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 GCLCP48506 637 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 ANXA11P50995 505 aaKnown RBP3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 WNT3P56703 355 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 LILRA4P59901 499 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 PIGFQ07326 219 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 DYRK1AQ13627 763 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 RAB32Q13637 225 aa3.54□□□□□ -1.84
HMGB1P30-201ENST00000492455 SLC35G1Q2M3R5 365 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms