RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 C15orf59Q2T9L4 293 aaPredicted RBP14.69□□□□□ -0.06
SMPD4-219ENST00000491128 PPP1R15BQ5SWA1 713 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 LIMS2Q7Z4I7 341 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 ABI1Q8IZP0 508 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 CRYBG2Q8N1P7 616 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 C3orf20Q8ND61 904 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 SLC35F5Q8WV83 523 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 GDAP1L1Q96MZ0 367 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 RTP3Q9BQQ7 232 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 PCSK1NQ9UHG2 260 aa14.69□□□□□ -0.06
SMPD4-219ENST00000491128 SCN5AQ14524 2016 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 ESYT3A0FGR9 886 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 GABRDO14764 452 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 HSPA1AP0DMV8 641 aaKnown RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 HSPA1BP0DMV9 641 aaKnown RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 WARSP23381 471 aaKnown RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 MAP3K7CLP57077 242 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 VSNL1P62760 191 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 ANKRD33Q7Z3H0 272 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 CEP57Q86XR8 500 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 ARFGAP1Q8N6T3 406 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 UBL4BQ8N7F7 174 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 STKLD1Q8NE28 680 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 SEPT8Q92599 483 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 RNF25Q96BH1 459 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 PCED1BQ96HM7 432 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 PBKQ96KB5 322 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.68□□□□□ -0.061e-6■■■□□ 17.5
SMPD4-219ENST00000491128 TMLHEQ9NVH6 421 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 PGRMC1O00264 195 aaKnown RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 PAPSS1O43252 624 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 EOMESO95936 686 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 TFE3P19532 575 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 PSMA2P25787 234 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 CTNNA1P35221 906 aaKnown RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 FLT3P36888 993 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 ATP11AP98196 1134 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 CC2D1AQ6P1N0 951 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-219ENST00000491128 OR10T2Q8NGX3 314 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 RSPH1Q8WYR4 309 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 CFAP57Q96MR6 1250 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 SYT15Q9BQS2 421 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 ZWILCHQ9H900 591 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 LRFN2Q9ULH4 789 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 PCDHA3Q9Y5H8 950 aa14.68□□□□□ -0.06
SMPD4-219ENST00000491128 ACRP10323 421 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 COL6A1P12109 1028 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 SKIP12755 728 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 RPL9P32969 192 aaKnown RBP14.67□□□□□ -0.06
SMPD4-219ENST00000491128 FAM182AQ5T1J6 154 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 LRRTM3Q86VH5 581 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 TMEM173Q86WV6 379 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-219ENST00000491128 CCDC50Q8IVM0 306 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 COLGALT2Q8IYK4 626 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 VWCEQ96DN2 955 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 TNIP3Q96KP6 325 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 FAM193BQ96PV7 902 aaPredicted RBP14.67□□□□□ -0.06
SMPD4-219ENST00000491128 UBN1Q9NPG3 1134 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 KIAA1257Q9ULG3 409 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 TBKBP1A7MCY6 615 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 GJA8P48165 433 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 PIGZQ86VD9 579 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 GPR161Q8N6U8 529 aaKnown RBP14.67□□□□□ -0.06
SMPD4-219ENST00000491128 ANKRD52Q8NB46 1076 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 IPO4Q8TEX9 1081 aaKnown RBP14.67□□□□□ -0.06
SMPD4-219ENST00000491128 TSPAN18Q96SJ8 248 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 FTHL17Q9BXU8 183 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 KRT82Q9NSB4 513 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 TMEM161AQ9NX61 479 aa14.67□□□□□ -0.06
SMPD4-219ENST00000491128 PDCD11Q14690 1871 aaKnown RBP14.66□□□□□ -0.06
SMPD4-219ENST00000491128 SIGLEC16A6NMB1 481 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 CSF2RAP15509 400 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 CLCN6P51797 869 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 KAZNQ674X7 775 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 TTC39CQ8N584 583 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 ACTRT1Q8TDG2 376 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 CASD1Q96PB1 797 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 NRDE2Q9H7Z3 1164 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 AMACRQ9UHK6 382 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 MYBL2P10244 700 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 KRT10P13645 584 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 IL1R2P27930 398 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 ATXN1P54253 815 aaKnown RBP14.66□□□□□ -0.06
SMPD4-219ENST00000491128 RWDD2BP57060 319 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 ADCY2Q08462 1091 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 BST2Q10589 180 aaKnown RBP14.66□□□□□ -0.06
SMPD4-219ENST00000491128 ARHGAP17Q68EM7 881 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 GPRIN1Q7Z2K8 1008 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 RASGEF1CQ8N431 466 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-219ENST00000491128 URGCPQ8TCY9 931 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 RXFP2Q8WXD0 754 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-219ENST00000491128 DDX27Q96GQ7 796 aaKnown RBP14.66□□□□□ -0.06
SMPD4-219ENST00000491128 ADAM33Q9BZ11 813 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 CARD9Q9H257 536 aa14.66□□□□□ -0.06
SMPD4-219ENST00000491128 IP6K2Q9UHH9 426 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms