RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SLX4Q8IY92 1834 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 CNTNAP2Q9UHC6 1331 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 RIPK2O43353 540 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TRAPPC3O43617 180 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TTC4O95801 387 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ZBTB48P10074 688 aaPredicted RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MYBL2P10244 700 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 CHRNB2P17787 502 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 KPNA2P52292 529 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ZNF844Q08AG5 666 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MAPRE1Q15691 268 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 FAM110CQ1W6H9 321 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 HSDL1Q3SXM5 330 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 GNASQ5JWF2 1037 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 PLEKHA7Q6IQ23 1121 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TADA2BQ86TJ2 420 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 PRELID2Q8N945 189 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 PPP1R2P1Q96PQ5 205 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 TGS1Q96RS0 853 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 FIZ1Q96SL8 496 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 COMMD10Q9Y6G5 202 aa7.69□□□□□ -1.18
NPHP3-208ENST00000490993 ZC3H4Q9UPT8 1303 aaKnown RBP7.69□□□□□ -1.18
NPHP3-208ENST00000490993 MTSS1O43312 755 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 FAM200BP0CF97 657 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 MX2P20592 715 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 LHX1P48742 406 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 PDK1Q15118 436 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ACOT1Q86TX2 421 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 CEP57Q86XR8 500 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 STMN2Q93045 179 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 MTG1Q9BT17 334 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 CDC42EP4Q9H3Q1 356 aaKnown RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 SNTG2Q9NY99 539 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 CPA4Q9UI42 421 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 AJAP1Q9UKB5 411 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 TSPAN16Q9UKR8 245 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 PCDHGC3Q9UN70 934 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 PABPN1LA6NDY0 278 aaKnown RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 FAM47DPA6NHR8 397 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 MEFVO15553 781 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 CREB3O43889 395 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 AKR1A1P14550 325 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 RAB27AP51159 221 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ZKSCAN8Q15776 578 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 SMTNL2Q2TAL5 461 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 MON1BQ7L1V2 547 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 SRLQ86TD4 932 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ADGRF2Q8IZF7 708 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ART4Q93070 314 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 TBC1D31Q96DN5 1066 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 FAM96AQ9H5X1 160 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 TMEM51Q9NW97 253 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 RBPJLQ9UBG7 517 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 COG5Q9UP83 839 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 DNALI1O14645 258 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 CTCFP49711 727 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 SERPINB9P50453 376 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 OTUD4Q01804 1114 aaKnown RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ADCY1Q08828 1119 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 C12orf50Q8NA57 414 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 RXFP2Q8WXD0 754 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 C9orf72Q96LT7 481 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 RILPQ96NA2 401 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 OSMRQ99650 979 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 BCAS3Q9H6U6 928 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ACP6Q9NPH0 428 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 DSEQ9UL01 958 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 PFDN6O15212 129 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ALDH1A1P00352 501 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 NUDT17P0C025 328 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ODC1P11926 461 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 KRT10P13645 584 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 PAX3P23760 479 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 FDFT1P37268 417 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 GEMIN4P57678 1058 aaKnown RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 DEUP1Q05D60 604 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 NME3Q13232 169 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 MOB2Q70IA6 237 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ZNF526Q8TF50 670 aaPredicted RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ALG3Q92685 438 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 PRMT1Q99873 361 aaKnown RBP7.68□□□□□ -1.18
NPHP3-208ENST00000490993 BEGAINQ9BUH8 593 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 FZD8Q9H461 694 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 RAB6BQ9NRW1 208 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 SLC24A2Q9UI40 661 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 INPP5FQ9Y2H2 1132 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 ECM29Q5VYK3 1845 aa7.68□□□□□ -1.18
NPHP3-208ENST00000490993 SMIM35A0A1B0GVV1 85 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 NFICP08651 508 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 MMP8P22894 467 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 TPI1P60174 286 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 AP1B1Q10567 949 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 LRRC52Q8N7C0 313 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 NFKBIZQ9BYH8 718 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 XAB2Q9HCS7 855 aaKnown RBP7.67□□□□□ -1.18
NPHP3-208ENST00000490993 BFARQ9NZS9 450 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 EFR3BQ9Y2G0 817 aa7.67□□□□□ -1.18
NPHP3-208ENST00000490993 PIK3R2O00459 728 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms