RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PI4K2AQ9BTU6 479 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 TEKT3Q9BXF9 490 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 ZNF341Q9BYN7 854 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 GPRC5DQ9NZD1 345 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 ATXN10Q9UBB4 475 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 DRG1Q9Y295 367 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 FAM237BA0A1B0GVD1 139 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 MAMLD1Q13495 774 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 ZFYVE27Q5T4F4 411 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 C6orf163Q5TEZ5 329 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 B3GNT9Q6UX72 402 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 MARK2Q7KZI7 788 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 RBM15BQ8NDT2 890 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 PPP2R3CQ969Q6 453 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 OLFM3Q96PB7 478 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 SLITRK1Q96PX8 696 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 TTC1Q99614 292 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 TBC1D30Q9Y2I9 924 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 SLC16A4O15374 487 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 RNASEH1O60930 286 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 ETV4P43268 484 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 ACTR3P61158 418 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 GCNT1Q02742 428 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 GAD2Q05329 585 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 LSAMPQ13449 338 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 C3orf62Q6ZUJ4 267 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 RCOR2Q8IZ40 523 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 TTC17Q96AE7 1141 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 PCDH9Q9HC56 1237 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 MRPL47Q9HD33 250 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 DNAJB4Q9UDY4 337 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 PHF24Q9UPV7 400 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 PCDHB2Q9Y5E7 798 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 DDX39AO00148 427 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 NDC80O14777 642 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 TM7SF2O76062 418 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 BAG2O95816 211 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 IFNB1P01574 187 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 ENO1P06733 434 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 ETS2P15036 469 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 VCPP55072 806 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 OASLQ15646 514 aaKnown RBP20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 MFSD7Q6UXD7 560 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 ZNF677Q86XU0 584 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 TREML1Q86YW5 311 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 ST13P4Q8IZP2 240 aaPredicted RBP20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 FAM111AQ96PZ2 611 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 POLIQ9UNA4 740 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 PLA2G4CQ9UP65 541 aa20.25■□□□□ 0.83
SNAPC3-206ENST00000490969 CAPN14A8MX76 684 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 MT-ND3P03897 115 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 DSG3P32926 999 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 MSS51Q4VC12 460 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 CCDC174Q6PII3 467 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 SV2AQ7L0J3 742 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 ENOSF1Q7L5Y1 443 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 ULK2Q8IYT8 1036 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 HAUS1Q96CS2 278 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 CLPTM1LQ96KA5 538 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 TMEM121Q9BTD3 319 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 SGK1O00141 431 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 TLR3O15455 904 aaKnown RBP20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 USP1O94782 785 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 IL1BP01584 269 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 KRT1P04264 644 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 ASNSP08243 561 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 PYGBP11216 843 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 STAT2P52630 851 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 FNBP1LQ5T0N5 605 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 CYTH2Q99418 400 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 ST6GALNAC4Q9H4F1 302 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 GGA3Q9NZ52 723 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 PPM1HQ9ULR3 514 aa20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 FARP1Q9Y4F1 1045 aaPredicted RBP20.24■□□□□ 0.83
SNAPC3-206ENST00000490969 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 IPO5O00410 1097 aaKnown RBP20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 TCF4P15884 667 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 TNFAIP1Q13829 316 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 CFAP157Q5JU67 520 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 STKLD1Q8NE28 680 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 WDR83Q9BRX9 315 aaKnown RBP20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 EBF3Q9H4W6 596 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 SLC7A8Q9UHI5 535 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 E5RJQ4 531 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 PEX3P56589 373 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 C1orf146Q5VVC0 180 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 ACAD11Q709F0 780 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 RHPN2Q8IUC4 686 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 PASD1Q8IV76 773 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 APOPT1Q96IL0 206 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 THTPAQ9BU02 230 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 GPAMQ9HCL2 828 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 STRIP2Q9ULQ0 834 aa20.23■□□□□ 0.83
SNAPC3-206ENST00000490969 PENKP01210 267 aaPredicted RBP20.22■□□□□ 0.83
SNAPC3-206ENST00000490969 ITGAVP06756 1048 aa20.22■□□□□ 0.83
SNAPC3-206ENST00000490969 POLR2MP0CAP2 368 aa20.22■□□□□ 0.83
SNAPC3-206ENST00000490969 PABPC4LP0CB38 370 aaKnown RBP20.22■□□□□ 0.83
SNAPC3-206ENST00000490969 RARRES1P49788 294 aa20.22■□□□□ 0.83
SNAPC3-206ENST00000490969 PLCB3Q01970 1234 aa20.22■□□□□ 0.83
SNAPC3-206ENST00000490969 ANKRD22Q5VYY1 191 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms