RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ZSCAN5DPP0CG00 497 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 IL10P22301 178 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 NAA20P61599 178 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 COG2Q14746 738 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 SNRNP35Q16560 246 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 CIAPIN1Q6FI81 312 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 PARVBQ9HBI1 364 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 COG5Q9UP83 839 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 GPR75-ASB3A0A0A6YYF3 556 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 CAPN8A6NHC0 703 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 KRT3P12035 628 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 TRPC1P48995 793 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 VCPP55072 806 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 DMPKQ09013 629 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 FAAP100Q0VG06 881 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 MYBPC3Q14896 1274 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 NOP9Q86U38 636 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 NLRX1Q86UT6 975 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 CPXCR1Q8N123 301 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 FAM71DQ8N9W8 422 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 CYGBQ8WWM9 190 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 VPS50Q96JG6 964 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 MCEEQ96PE7 176 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 BEGAINQ9BUH8 593 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 FGFBP2Q9BYJ0 223 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 THAP1Q9NVV9 213 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 EURLQ9NYK6 297 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 ASB3Q9Y575 518 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 SNX13Q9Y5W8 968 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 PEAK1Q9H792 1746 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 WDR46O15213 610 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 TMEM191BP0C7N4 346 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 SERPINB1P30740 379 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 MRPS22P82650 360 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 MRPS15P82914 257 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 TAP1Q03518 808 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 BST1Q10588 318 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 PRPSAP1Q14558 356 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 NCAPG2Q86XI2 1143 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 TRIM50Q86XT4 487 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 ZNF677Q86XU0 584 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 SEPT12Q8IYM1 358 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 DNAAF3Q8N9W5 541 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 ACSF2Q96CM8 615 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 COPS7BQ9H9Q2 264 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 DDX28Q9NUL7 540 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 SELENONQ9NZV5 590 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 SLC17A7Q9P2U7 560 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 DENND3A2RUS2 1198 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 LRRIQ4A6NIV6 560 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 SERPINB5P36952 375 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 FDFT1P37268 417 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 HPCAP84074 193 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 KCNA1Q09470 495 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 PIGHQ14442 188 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 ZC3H12AQ5D1E8 599 aaKnown RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 DCAF12L1Q5VU92 463 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 ZNF34Q8IZ26 560 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 TMCO5AQ8N6Q1 288 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 EPS8L1Q8TE68 723 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 C17orf50Q8WW18 174 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 POLR3CQ9BUI4 534 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 GCOM2Q9BZD3 368 aaPredicted RBP11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 TMEM8AQ9HCN3 771 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 BTG4Q9NY30 223 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 KCND2Q9NZV8 630 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 DOLKQ9UPQ8 538 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 PHF24Q9UPV7 400 aa11.75□□□□□ -0.53
CRNKL1-204ENST00000490910 C2orf71A6NGG8 1288 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 PRR5-ARHGAP8B1AHC4 643 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 ECE2O60344 883 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 TCEA3O75764 348 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 PIAS1O75925 651 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 C6orf222P0C671 652 aaPredicted RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 BCAR1P56945 870 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 ARHGAP8P85298 464 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 LSAMPQ13449 338 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 MAPRE2Q15555 327 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 SMAD1Q15797 465 aaKnown RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 MAPK6Q16659 721 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 CCNYL1Q8N7R7 359 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 GABPB2Q8TAK5 448 aaPredicted RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 CYLDQ9NQC7 956 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 MRC1P22897 1456 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 MATN2O00339 956 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 KPNA4O00629 521 aaPredicted RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 MGEA5O60502 916 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 DAB1O75553 588 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 KRT8P05787 483 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 CCR3P51677 355 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 TFDP3Q5H9I0 405 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 SPDYAQ5MJ70 313 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 CLEC10AQ8IUN9 316 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 TERB1Q8NA31 727 aa11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 SLC7A6OSQ96CW6 309 aaPredicted RBP11.74□□□□□ -0.53
CRNKL1-204ENST00000490910 BTBD9Q96Q07 612 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms