RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 PIK3CAP42336 1068 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 ASPAP45381 313 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 MLLT6P55198 1093 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-206ENST00000490831 UBE2HP62256 183 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 CYP27A1Q02318 531 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 MON1AQ86VX9 555 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 UNC93AQ86WB7 457 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 SCN4BQ8IWT1 228 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 CMTM8Q8IZV2 173 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 PJA1Q8NG27 643 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 TAS1R2Q8TE23 839 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 ELMO3Q96BJ8 720 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 DHTKD1Q96HY7 919 aaPredicted RBP16.21■□□□□ 0.19
COL27A1-206ENST00000490831 FAXDC2Q96IV6 333 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 TNIP3Q96KP6 325 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 LRRC3BQ96PB8 259 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 TSG101Q99816 390 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 TTLL2Q9BWV7 592 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 ELOVL4Q9GZR5 314 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 IRF2BPLQ9H1B7 796 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 SIT1Q9Y3P8 196 aa16.21■□□□□ 0.19
COL27A1-206ENST00000490831 F5P12259 2224 aa16.21■□□□□ 0.18
COL27A1-206ENST00000490831 ZNF263O14978 683 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 GDI1P31150 447 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 GRIK1P39086 918 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 RAP1GAPP47736 663 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 NOP14P78316 857 aaKnown RBP16.2■□□□□ 0.18
COL27A1-206ENST00000490831 INCA1Q0VD86 236 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 STIM1Q13586 685 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 MORC3Q14149 939 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 KRT39Q6A163 491 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 SPOPLQ6IQ16 392 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 SCARA5Q6ZMJ2 495 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 CRYBG2Q8N1P7 616 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 DTWD2Q8NBA8 298 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 MRPS31Q92665 395 aaKnown RBP16.2■□□□□ 0.18
COL27A1-206ENST00000490831 EEF2KMTQ96G04 330 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 B3GNT5Q9BYG0 378 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 FOXQ1Q9C009 403 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 ZNF518BQ9C0D4 1074 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 CYP3A43Q9HB55 503 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 APOBEC3GQ9HC16 384 aaKnown RBP16.2■□□□□ 0.18
COL27A1-206ENST00000490831 HEBP1Q9NRV9 189 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 TMEM30AQ9NV96 361 aa16.2■□□□□ 0.18
COL27A1-206ENST00000490831 MAGED2Q9UNF1 606 aaPredicted RBP16.2■□□□□ 0.18
COL27A1-206ENST00000490831 PIEZO1Q92508 2521 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 KIF26AQ9ULI4 1882 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-206ENST00000490831 COL4A3Q01955 1670 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 F8VP50 259 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 STK25O00506 426 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 PSMA7O14818 248 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 STX10O60499 249 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 GLULP15104 373 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 CD44P16070 742 aaKnown RBP16.19■□□□□ 0.18
COL27A1-206ENST00000490831 RFX1P22670 979 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 ANXA13P27216 316 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 ANP32AP39687 249 aaKnown RBP16.19■□□□□ 0.18
COL27A1-206ENST00000490831 CACNA2D1P54289 1103 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 ZNF268Q14587 947 aaPredicted RBP16.19■□□□□ 0.18
COL27A1-206ENST00000490831 TXNDC8Q6A555 127 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 DENND5BQ6ZUT9 1274 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 PAQR9Q6ZVX9 377 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 CELF5Q8N6W0 485 aaKnown RBP16.19■□□□□ 0.18
COL27A1-206ENST00000490831 MAB21L3Q8N8X9 362 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 NELL2Q99435 816 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 IMPG2Q9BZV3 1241 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 KIF9Q9HAQ2 790 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 LTB4R2Q9NPC1 389 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 EHD2Q9NZN4 543 aa16.19■□□□□ 0.18
COL27A1-206ENST00000490831 TRIM49BA6NDI0 452 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 PPP1R3GB7ZBB8 358 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 DPYSL4O14531 572 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 PFKLP17858 780 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 MXI1P50539 228 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 NDST1P52848 882 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 USP46P62068 366 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 ARHGAP29Q52LW3 1261 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 TTI2Q6NXR4 508 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 ZNF852Q6ZMS4 543 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 TPRG1Q6ZUI0 275 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 FAM35AQ86V20 835 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 ZNF687Q8N1G0 1237 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 FBXL13Q8NEE6 735 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 BPIFB1Q8TDL5 484 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 SEMA4DQ92854 862 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 USP13Q92995 863 aaPredicted RBP16.18■□□□□ 0.18
COL27A1-206ENST00000490831 CEP63Q96MT8 703 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 NIF3L1Q9GZT8 377 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 HMGXB4Q9UGU5 601 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 COQ4Q9Y3A0 265 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 ATP8B3O60423 1300 aa16.18■□□□□ 0.18
COL27A1-206ENST00000490831 ANAPC1Q9H1A4 1944 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 CLDN5O00501 218 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 MAN2B1O00754 1011 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 LRRN2O75325 713 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 DCNP07585 359 aaKnown RBP16.17■□□□□ 0.18
COL27A1-206ENST00000490831 AVPR1AP37288 418 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 MAGEA9P43362 315 aa16.17■□□□□ 0.18
COL27A1-206ENST00000490831 PPP3CCP48454 512 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms