RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 GOLGA8DPQ0D2H9 430 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
VARS2-210ENST00000490699 IRF2BP2Q7Z5L9 587 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 NOP9Q86U38 636 aaKnown RBP11.59□□□□□ -0.55
VARS2-210ENST00000490699 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 GPIHBP1Q8IV16 184 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 SCN4BQ8IWT1 228 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 C12orf29Q8N999 325 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 ANKRD52Q8NB46 1076 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 TRIM11Q96F44 468 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 PGLYRP2Q96PD5 576 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 KLHL5Q96PQ7 755 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 PPP1R9BQ96SB3 815 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 SEPT5Q99719 369 aaPredicted RBP11.59□□□□□ -0.55
VARS2-210ENST00000490699 RTP3Q9BQQ7 232 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 CLSTN3Q9BQT9 956 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 LHX5Q9H2C1 402 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 NHEJ1Q9H9Q4 299 aaPredicted RBP11.59□□□□□ -0.55
VARS2-210ENST00000490699 CYP4F11Q9HBI6 524 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 LMCD1Q9NZU5 365 aa11.59□□□□□ -0.55
VARS2-210ENST00000490699 MTMR11A4FU01 709 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 FSCN2O14926 492 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 ARHGAP6O43182 974 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 HCRTO43612 131 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 TBC1D4O60343 1298 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 LRG1P02750 347 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 MMEP08473 750 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 ATF2P15336 505 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 DESP17661 470 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 BDNFP23560 247 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 EIF4A3P38919 411 aaKnown RBP11.58□□□□□ -0.56
VARS2-210ENST00000490699 MAGEA11P43364 429 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 ACADSBP45954 432 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 KIF11P52732 1056 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 KRT83P78385 493 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 C10orf76Q5T2E6 689 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 RTL10Q7L3V2 364 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 PASD1Q8IV76 773 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 LRRC8AQ8IWT6 810 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 FUKQ8N0W3 1084 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 SLC20A1Q8WUM9 679 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 CEP295NLQ96MC4 621 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 TMEM209Q96SK2 561 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 DUSP16Q9BY84 665 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 B3GNT5Q9BYG0 378 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 NSUN3Q9H649 340 aaKnown RBP11.58□□□□□ -0.56
VARS2-210ENST00000490699 LRRC4Q9HBW1 653 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 NOCTQ9UK39 431 aaKnown RBP11.58□□□□□ -0.56
VARS2-210ENST00000490699 STRIP2Q9ULQ0 834 aa11.58□□□□□ -0.56
VARS2-210ENST00000490699 COL4A4P53420 1690 aaPredicted RBP11.58□□□□□ -0.56
VARS2-210ENST00000490699 WDR27A2RRH5 827 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 CLDN5O00501 218 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 XPO1O14980 1071 aaKnown RBP11.57□□□□□ -0.56
VARS2-210ENST00000490699 SART1O43290 800 aaKnown RBP11.57□□□□□ -0.56
VARS2-210ENST00000490699 DNAJB1P25685 340 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 EPHB3P54753 998 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 MAP3K7CLP57077 242 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 SLC18A3Q16572 532 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 RNF19BQ6ZMZ0 732 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 ZNF571Q7Z3V5 609 aaPredicted RBP11.57□□□□□ -0.56
VARS2-210ENST00000490699 SPRED2Q7Z698 418 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 ITIH5Q86UX2 942 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 ERICH1Q86X53 443 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 SIX6OS1Q8N1H7 587 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 UBA3Q8TBC4 463 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 TFAP2BQ92481 460 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 GOLGA1Q92805 767 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 SECISBP2LQ93073 1101 aaKnown RBP11.57□□□□□ -0.56
VARS2-210ENST00000490699 PNPLA8Q9NP80 782 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 ACP6Q9NPH0 428 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 CYLDQ9NQC7 956 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 ARHGAP20Q9P2F6 1191 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 ADAMTS1Q9UHI8 967 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 NME7Q9Y5B8 376 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 MYH10P35580 1976 aa11.57□□□□□ -0.56
VARS2-210ENST00000490699 ANKRD62A6NC57 917 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 HIDE1A8MVS5 230 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 TGM5O43548 720 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 NCK2O43639 380 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 LILRB3O75022 631 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 XYLBO75191 536 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 RTN2O75298 545 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 ABLIM3O94929 683 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 RTN3O95197 1032 aaPredicted RBP11.56□□□□□ -0.56
VARS2-210ENST00000490699 CALB1P05937 261 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 MYBL1P10243 752 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 GZMAP12544 262 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
VARS2-210ENST00000490699 IRS1P35568 1242 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 FMO1Q01740 532 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 PDE4CQ08493 712 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 DUSP4Q13115 394 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 CLEC16AQ2KHT3 1053 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 PPM1LQ5SGD2 360 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 CCDC122Q5T0U0 273 aa11.56□□□□□ -0.56
VARS2-210ENST00000490699 NAA35Q5VZE5 725 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms