RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 POU5F1BQ06416 359 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLC12A1Q13621 1099 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 DHX34Q14147 1143 aaKnown RBP15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLFN11Q7Z7L1 901 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 RASAL3Q86YV0 1011 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 FAM71BQ8TC56 605 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 ASS1P00966 412 aaKnown RBP15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLC24A5Q71RS6 500 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 LRRC8DQ7L1W4 858 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZNF571Q7Z3V5 609 aaPredicted RBP15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 ARHGEF19Q8IW93 802 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 STMN2Q93045 179 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 SNF8Q96H20 258 aa15.02□□□□□ -0.01
ARHGEF39-205ENST00000490638 COL1A2P08123 1366 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 SDK1Q7Z5N4 2213 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 MTSS1O43312 755 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ACLYP53396 1101 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 HIF1AQ16665 826 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ARHGEF26Q96DR7 871 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZBTB10Q96DT7 871 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 DCUN1D1Q96GG9 259 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 GPATCH2LQ9NWQ4 482 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZFATQ9P243 1243 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 SLC45A1Q9Y2W3 748 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 GIT1Q9Y2X7 761 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ADCY6O43306 1168 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 KLRC4O43908 158 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 NSUN2Q08J23 767 aaKnown RBP eCLIP15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 CES5AQ6NT32 575 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 FRA10AC1Q70Z53 315 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 SCUBE3Q8IX30 993 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 C4orf32Q8N8J7 132 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ATP11CQ8NB49 1132 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ARHGAP42A6NI28 874 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ENDOD1O94919 500 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ADRB2P07550 413 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 PPM1AP35813 382 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 DLG4P78352 724 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZNF200P98182 395 aaPredicted RBP15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 C6orf118Q5T5N4 469 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 IPMKQ8NFU5 416 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 CHST12Q9NRB3 414 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 PCDHA2Q9Y5H9 948 aa15.01□□□□□ -0.01
ARHGEF39-205ENST00000490638 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 FAM237AA0A1B0GTK4 181 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 PRR23AA6NEV1 266 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 DNAJC6O75061 913 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 ARSHQ5FYA8 562 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 SIAH1Q8IUQ4 282 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 OR5B17Q8NGF7 314 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 TTC8Q8TAM2 541 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 KAT5Q92993 513 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 MTMR8Q96EF0 704 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 DNAJC7Q99615 494 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 C2CD2Q9Y426 696 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 COL1A1P02452 1464 aaPredicted RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 MAP1BP46821 2468 aaKnown RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 FGBP02675 491 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 PTPN1P18031 435 aaKnown RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 AMPD2Q01433 879 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 TLE2Q04725 743 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 ADCY2Q08462 1091 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 MTM1Q13496 603 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 CAPS2Q9BXY5 557 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 DHX33Q9H6R0 707 aaKnown RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 ARHGAP20Q9P2F6 1191 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 TSR3Q9UJK0 312 aaKnown RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 ZMYND8Q9ULU4 1186 aaPredicted RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 PRRC2BQ5JSZ5 2229 aaKnown RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 COPEO14579 308 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 PMPCBO75439 489 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 CCDC15Q0P6D6 951 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 CASP8Q14790 479 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 DBF4BQ8NFT6 615 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 CREBZFQ9NS37 354 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 VPS28Q9UK41 221 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 NUDT5Q9UKK9 219 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 DOT1LQ8TEK3 1739 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 EFCAB14O75071 495 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 PAEPP09466 180 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 CCR1P32246 355 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 GRM5P41594 1212 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 CTCFP49711 727 aaPredicted RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 TUSC3Q13454 348 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 POLD3Q15054 466 aaPredicted RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 RBBP5Q15291 538 aaKnown RBP15□□□□□ -0.01
ARHGEF39-205ENST00000490638 C7orf61Q8IZ16 206 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 CDC26Q8NHZ8 85 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 SMYD3Q9H7B4 428 aa15□□□□□ -0.01
ARHGEF39-205ENST00000490638 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 AKT1P31749 480 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 TPD52P55327 224 aaPredicted RBP14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 KLHL38Q2WGJ6 581 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 CACNA2D3Q8IZS8 1091 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 CARNMT1Q8N4J0 409 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 PACSIN1Q9BY11 444 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 GPR63Q9BZJ6 419 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 CARD9Q9H257 536 aa14.99□□□□□ -0.01
ARHGEF39-205ENST00000490638 IPPQ9Y573 584 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms