RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 OGDHLQ9ULD0 1010 aa6.42□□□□□ -1.38
CCDC39-206ENST00000489868 MARCH6O60337 910 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 MGEA5O60502 916 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 URI1O94763 535 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-206ENST00000489868 IL6RP08887 468 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-206ENST00000489868 ZKSCAN1P17029 563 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-206ENST00000489868 LRPAP1P30533 357 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 NANOS3P60323 173 aaKnown RBP6.41□□□□□ -1.38
CCDC39-206ENST00000489868 E2F2Q14209 437 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 TREML2Q5T2D2 321 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 KCTD20Q7Z5Y7 419 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 CAGE1Q8TC20 777 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 BPIFB1Q8TDL5 484 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 BBC3Q96PG8 261 aaPredicted RBP6.41□□□□□ -1.38
CCDC39-206ENST00000489868 ZNF287Q9HBT7 754 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 ADAM21Q9UKJ8 722 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 INSL6Q9Y581 213 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 SNX14Q9Y5W7 946 aa6.41□□□□□ -1.38
CCDC39-206ENST00000489868 CCDC151A5D8V7 595 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 MBD3L4A6NDZ8 208 aaPredicted RBP6.4□□□□□ -1.38
CCDC39-206ENST00000489868 MBD3L3A6NE82 208 aaPredicted RBP6.4□□□□□ -1.38
CCDC39-206ENST00000489868 XRCC6P12956 609 aaKnown RBP eCLIP6.4□□□□□ -1.38
CCDC39-206ENST00000489868 SLC5A1P13866 664 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 ATXN1P54253 815 aaKnown RBP6.4□□□□□ -1.38
CCDC39-206ENST00000489868 LY6KQ17RY6 165 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 ERCC6LQ2NKX8 1250 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 MGAT5BQ3V5L5 792 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 TSTD2Q5T7W7 516 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 DEPDC1Q5TB30 811 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 PRIMA1Q86XR5 153 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 KRT78Q8N1N4 520 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 NTN5Q8WTR8 489 aaPredicted RBP6.4□□□□□ -1.38
CCDC39-206ENST00000489868 TMEM171Q8WVE6 324 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 GLG1Q92896 1179 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 SPSB4Q96A44 273 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 MSLNLQ96KJ4 702 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 SEMA4GQ9NTN9 838 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 SERTAD4Q9NUC0 356 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 FAM50BQ9Y247 325 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 ENTPD2Q9Y5L3 495 aa6.4□□□□□ -1.38
CCDC39-206ENST00000489868 H7C4K7 107 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 APAF1O14727 1248 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 SLC16A3O15427 465 aaKnown RBP6.39□□□□□ -1.39
CCDC39-206ENST00000489868 VNN1O95497 513 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 FESP07332 822 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 KLRC1P26715 233 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 GNALP38405 381 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 PIK3CBP42338 1070 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 HTRA4P83105 476 aaPredicted RBP6.39□□□□□ -1.39
CCDC39-206ENST00000489868 ZNF618Q5T7W0 954 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 FBXO42Q6P3S6 717 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 ARHGEF25Q86VW2 580 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 ADGRG3Q86Y34 549 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 SLC15A3Q8IY34 581 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 ATRIPQ8WXE1 791 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 TIMP4Q99727 224 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 SARGQ9BW04 601 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 STK31Q9BXU1 1019 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 AS3MTQ9HBK9 375 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 XPNPEP3Q9NQH7 507 aa6.39□□□□□ -1.39
CCDC39-206ENST00000489868 DNMT3BQ9UBC3 853 aaKnown RBP6.39□□□□□ -1.39
CCDC39-206ENST00000489868 A1L4Q6 167 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 LRRC3CA6NJW4 275 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 TLR5O60602 858 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 IGLV2-14P01704 120 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 EBLN1P0CF75 366 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 PDE6CP51160 858 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 BMPR2Q13873 1038 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 NPY5RQ15761 445 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 SLC44A4Q53GD3 710 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 FCRL6Q6DN72 434 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 RASAL3Q86YV0 1011 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 DNAJC10Q8IXB1 793 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 BOLLQ8N9W6 283 aaKnown RBP6.38□□□□□ -1.39
CCDC39-206ENST00000489868 PHKBQ93100 1093 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 PPP2R3CQ969Q6 453 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 TTC17Q96AE7 1141 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 R3HDM4Q96D70 268 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 UROC1Q96N76 676 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 BTBD1Q9H0C5 482 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 CHST8Q9H2A9 424 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 GBA2Q9HCG7 927 aaPredicted RBP6.38□□□□□ -1.39
CCDC39-206ENST00000489868 SLC17A6Q9P2U8 582 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 CORO2BQ9UQ03 480 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 CDY1Q9Y6F8 540 aa6.38□□□□□ -1.39
CCDC39-206ENST00000489868 KIF3BO15066 747 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 PQBP1O60828 265 aaKnown RBP6.37□□□□□ -1.39
CCDC39-206ENST00000489868 DRD4P21917 467 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 COBLL1Q53SF7 1204 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 STRIP1Q5VSL9 837 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 UNC13DQ70J99 1090 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 ZNF551Q7Z340 670 aaPredicted RBP6.37□□□□□ -1.39
CCDC39-206ENST00000489868 AMIGO2Q86SJ2 522 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 ABRAQ8N0Z2 381 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 GLOD4Q9HC38 313 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 CPNE5Q9HCH3 593 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 ARHGEF3Q9NR81 526 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 DLL3Q9NYJ7 618 aa6.37□□□□□ -1.39
CCDC39-206ENST00000489868 ARPP21Q9UBL0 812 aaPredicted RBP6.37□□□□□ -1.39
CCDC39-206ENST00000489868 MID2Q9UJV3 735 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms