RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CCDC68Q9H2F9 335 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 TRABDQ9H4I3 376 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PSTPIP2Q9H939 334 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF287Q9HBT7 754 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 PALMDQ9NP74 551 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 IGSF9Q9P2J2 1179 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 GMPR2Q9P2T1 348 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 SATB2Q9UPW6 733 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RABGAP1Q9Y3P9 1069 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 RTL9Q8NET4 1388 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 ZMYM2Q9UBW7 1377 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 KDM3BQ7LBC6 1761 aa4.99□□□□□ -1.61
SNRNP40-206ENST00000489853 NCANO14594 1321 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 SYNGAP1Q96PV0 1343 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PRR36Q9H6K5 1346 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 A0A087WZG4 1122 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ANKRD62A6NC57 917 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 RSPH10B2B2RC85 870 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM114B3SHH9 223 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 H3BNX3 289 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF701M0R085 212 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TXNDC9O14530 226 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ZBTB24O43167 697 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PDE8AO60658 829 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 DNAJA2O60884 412 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 USP1O94782 785 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 GNRH1P01148 92 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ABHD2P08910 425 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TMEM253P0C7T8 217 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 RSPH10BP0C881 870 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CALM1P0DP23 149 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CALM2P0DP24 149 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CALM3P0DP25 149 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 THRAP10827 490 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CETPP11597 493 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PDE6AP16499 860 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CALML3P27482 149 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 SERPINB6P35237 376 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 STT3AP46977 705 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PCYT1AP49585 367 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 MXI1P50539 228 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 GALCP54803 685 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 NCKAP1LP55160 1127 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CBLBQ13191 982 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 IFIT5Q13325 482 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 UBE4AQ14139 1066 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CTTNQ14247 550 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TNIP1Q15025 636 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 RASA2Q15283 850 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CYTH1Q15438 398 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TBCCQ15814 346 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 KCTD19Q17RG1 926 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 C6orf183Q5T699 404 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 LPCAT4Q643R3 524 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC27Q6P3X3 843 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC23LQ6PF05 361 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 DCLRE1AQ6PJP8 1040 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CLEC4GQ6UXB4 293 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 RFX8Q6ZV50 586 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CENPUQ71F23 418 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 MIER3Q7Z3K6 550 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CYP2U1Q7Z449 544 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF804AQ7Z570 1209 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ADAT2Q7Z6V5 191 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ANKRD13BQ86YJ7 626 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ZNF295-AS1Q8N0V1 137 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TTC5Q8N0Z6 440 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 UBL4BQ8N7F7 174 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ENAHQ8N8S7 591 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 RFWD2Q8NHY2 731 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC35G2Q8TBE7 412 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 XAGE3Q8WTP9 111 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 RFFLQ8WZ73 363 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 JADE3Q92613 823 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PLEKHA8Q96JA3 519 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 CSRNP1Q96S65 589 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 OLFM1Q99784 485 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PAIP1Q9H074 479 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 VPS11Q9H270 941 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PPCSQ9HAB8 311 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC38A7Q9NVC3 462 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 NINJ2Q9NZG7 142 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 TBK1Q9UHD2 729 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 SLC7A8Q9UHI5 535 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 GNPTGQ9UJJ9 305 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PCDHA4Q9UN74 947 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 ERVK-11Q9UQG0 969 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 BCS1LQ9Y276 419 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 INPP5FQ9Y2H2 1132 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 SUGT1Q9Y2Z0 365 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 MAD1L1Q9Y6D9 718 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 SQORQ9Y6N5 450 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 PCDH11YQ9BZA8 1340 aa4.98□□□□□ -1.61
SNRNP40-206ENST00000489853 A0A0G2JND7 137 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ANKRD34BA5PLL1 514 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 NOTOA8MTQ0 251 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 CAPN14A8MX76 684 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 ANKRD63C9JTQ0 380 aa4.97□□□□□ -1.61
SNRNP40-206ENST00000489853 FCHO1O14526 889 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms