RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 H7C1Q1 480 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 NPSP0C0P6 89 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 CYP2C9P11712 490 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 CTGFP29279 349 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 LRPAP1P30533 357 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 PTGER1P34995 402 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 PDE6CP51160 858 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 ARFIP2P53365 341 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 PDE1AP54750 535 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 WNT3P56703 355 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 RAB1AP62820 205 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 ZNF267Q14586 743 aaPredicted RBP3.92□□□□□ -1.78
CPSF3-205ENST00000489629 TRIM72Q6ZMU5 477 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 ZNF280BQ86YH2 543 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 C8orf58Q8NAV2 365 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 CYP2W1Q8TAV3 490 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 MTFMTQ96DP5 389 aaKnown RBP3.92□□□□□ -1.78
CPSF3-205ENST00000489629 RITA1Q96K30 269 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 LENG8Q96PV6 779 aaPredicted RBP3.92□□□□□ -1.78
CPSF3-205ENST00000489629 PUS7Q96PZ0 661 aaKnown RBP3.92□□□□□ -1.78
CPSF3-205ENST00000489629 ASB2Q96Q27 587 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 P2RX7Q99572 595 aaKnown RBP3.92□□□□□ -1.78
CPSF3-205ENST00000489629 CXorf36Q9H7Y0 433 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 NRIP3Q9NQ35 241 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 AASDHPPTQ9NRN7 309 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 GABBR1Q9UBS5 961 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 TMX2Q9Y320 296 aa3.92□□□□□ -1.78
CPSF3-205ENST00000489629 FER1L4A9Z1Z3 1794 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 SMIM35A0A1B0GVV1 85 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 OFD1O75665 1012 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 KCNA3P22001 575 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 DGKEP52429 567 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 MAPK7Q13164 816 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 FGL2Q14314 439 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 DAZAP2Q15038 168 aaPredicted RBP3.91□□□□□ -1.78
CPSF3-205ENST00000489629 TBC1D25Q3MII6 688 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 SLC9A4Q6AI14 798 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 FCRL6Q6DN72 434 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 B3GNT9Q6UX72 402 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 GAS2L3Q86XJ1 694 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 SLC15A3Q8IY34 581 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 ABRAQ8N0Z2 381 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 GALNT16Q8N428 558 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 PNLDC1Q8NA58 520 aaKnown RBP3.91□□□□□ -1.78
CPSF3-205ENST00000489629 XAGE5Q8WWM1 108 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 RHOBTB2Q9BYZ6 727 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 DPH1Q9BZG8 443 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 PRSS22Q9GZN4 317 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 STAP2Q9UGK3 403 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 CPA4Q9UI42 421 aa3.91□□□□□ -1.78
CPSF3-205ENST00000489629 PNMA8BQ9ULN7 279 aaPredicted RBP3.91□□□□□ -1.78
CPSF3-205ENST00000489629 A0A087WWL8 130 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 CYP2D7A0A087X1C5 515 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 H3BML4 177 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 UBXN7O94888 489 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 PDE8BO95263 885 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 TOP3BO95985 862 aaKnown RBP3.9□□□□□ -1.79
CPSF3-205ENST00000489629 NPR1P16066 1061 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 ADORA2AP29274 412 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 TPTEP56180 551 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 KRTAP10-9P60411 292 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 MCL1Q07820 350 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 CYP1B1Q16678 543 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 LY6KQ17RY6 165 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 IFIT1BQ5T764 474 aaKnown RBP3.9□□□□□ -1.79
CPSF3-205ENST00000489629 DEPDC1Q5TB30 811 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 SLC2A7Q6PXP3 512 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 MTHFD1LQ6UB35 978 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 KIRREL2Q6UWL6 708 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 DNAJC5GQ8N7S2 189 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 ABHD11Q8NFV4 315 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 OSCP1Q8WVF1 389 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 DAZAP1Q96EP5 407 aaKnown RBP3.9□□□□□ -1.79
CPSF3-205ENST00000489629 ZC3H10Q96K80 434 aaKnown RBP3.9□□□□□ -1.79
CPSF3-205ENST00000489629 C5orf34Q96MH7 638 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 FCRL4Q96PJ5 515 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 TRIM54Q9BYV2 358 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 PDGFCQ9NRA1 345 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 PIH1D1Q9NWS0 290 aaKnown RBP3.9□□□□□ -1.79
CPSF3-205ENST00000489629 NOP58Q9Y2X3 529 aaKnown RBP3.9□□□□□ -1.79
CPSF3-205ENST00000489629 SNX14Q9Y5W7 946 aa3.9□□□□□ -1.79
CPSF3-205ENST00000489629 TCRBV5S1A1TA0A578 114 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 POC1B-GALNT4F8VUJ3 575 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 PPEF2O14830 753 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 KCNAB3O43448 404 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 AP1G1O43747 822 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 ALDH1L1O75891 902 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 IGKV2-30P06310 120 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 DLDP09622 509 aaKnown RBP3.89□□□□□ -1.79
CPSF3-205ENST00000489629 XRCC6P12956 609 aaKnown RBP eCLIP3.89□□□□□ -1.79
CPSF3-205ENST00000489629 NCLP19338 710 aaKnown RBP3.89□□□□□ -1.79
CPSF3-205ENST00000489629 HTR1BP28222 390 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 GPSM2P81274 684 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 CTBP1Q13363 440 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 RNASE12Q5GAN4 147 aaKnown RBP3.89□□□□□ -1.79
CPSF3-205ENST00000489629 BHLHA9Q7RTU4 235 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 DENND1CQ8IV53 801 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 IZUMO1Q8IYV9 350 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 GALNT4Q8N4A0 578 aa3.89□□□□□ -1.79
CPSF3-205ENST00000489629 TERB1Q8NA31 727 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms