RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 TRIM65Q6PJ69 517 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 C4orf50Q6ZRC1 276 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 APTXQ7Z2E3 356 aaKnown RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 SCN4BQ8IWT1 228 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 GJD3Q8N144 294 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 PPM1KQ8N3J5 372 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 SLC4A11Q8NBS3 891 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 PSMG2Q969U7 264 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 FUBP3Q96I24 572 aaKnown RBP eCLIP8.36□□□□□ -1.076e-8■■□□□ 13.4
SSR1-210ENST00000489567 FAXDC2Q96IV6 333 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 TNIP3Q96KP6 325 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 ZNF512Q96ME7 567 aaPredicted RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 NT5C1BQ96P26 610 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 KCNK16Q96T55 309 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 NT5C1AQ9BXI3 368 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 VPS16Q9H269 839 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 SIX2Q9NPC8 291 aa8.36□□□□□ -1.07
SSR1-210ENST00000489567 AJAP1Q9UKB5 411 aaPredicted RBP8.36□□□□□ -1.07
SSR1-210ENST00000489567 F8VP50 259 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
SSR1-210ENST00000489567 MYL4P12829 197 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 CEBPBP17676 345 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 SSTR3P32745 418 aaPredicted RBP8.35□□□□□ -1.07
SSR1-210ENST00000489567 GRIK1P39086 918 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 MAGEA11P43364 429 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 CETN1Q12798 172 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 IQCB1Q15051 598 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 MAPRE1Q15691 268 aaKnown RBP8.35□□□□□ -1.07
SSR1-210ENST00000489567 EXOC3L4Q17RC7 722 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 IQCEQ6IPM2 695 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 GAREM2Q75VX8 874 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 TMEM150AQ86TG1 271 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 FAM35AQ86V20 835 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 NPAS3Q8IXF0 933 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 SLC2A14Q8TDB8 520 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 FGF13Q92913 245 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 TMEM176AQ96HP8 235 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 BPIFA3Q9BQP9 254 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 IL21Q9HBE4 155 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 USTQ9Y2C2 406 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 MRPS23Q9Y3D9 190 aaKnown RBP8.35□□□□□ -1.07
SSR1-210ENST00000489567 PTPRDP23468 1912 aa8.35□□□□□ -1.07
SSR1-210ENST00000489567 A0A1W2PRU2 124 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 GTPBP10A4D1E9 387 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 PES1O00541 588 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 ASGR2P07307 311 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 TBXAS1P24557 533 aaPredicted RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 ADORA2BP29275 332 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 GBP2P32456 591 aaPredicted RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 USP46P62068 366 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 GCNT1Q02742 428 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 PLD1Q13393 1074 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 STXBP5Q5T5C0 1151 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 VSTM1Q6UX27 236 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 GBP6Q6ZN66 633 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 PDZD4Q76G19 769 aaPredicted RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 LUZP1Q86V48 1076 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 RNF135Q8IUD6 432 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 ELMOD1Q8N336 334 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 TDRD5Q8NAT2 981 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 ZMIZ2Q8NF64 920 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 SHKBP1Q8TBC3 707 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 RSAD2Q8WXG1 361 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 CYFIP2Q96F07 1278 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 ZSWIM3Q96MP5 696 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 SMOQ99835 787 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 ZSWIM1Q9BR11 485 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 MED10Q9BTT4 135 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 NAT10Q9H0A0 1025 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 UBE2TQ9NPD8 197 aaPredicted RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 AVENQ9NQS1 362 aaPredicted RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 ASAH2Q9NR71 780 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 KRT82Q9NSB4 513 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 LIMD1Q9UGP4 676 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 MAGED2Q9UNF1 606 aaPredicted RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 ASB3Q9Y575 518 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 DOCK8Q8NF50 2099 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 SLC38A8A6NNN8 435 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 TADA3O75528 432 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 LAMP2P13473 410 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 GABRR2P28476 465 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 KLK7P49862 253 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 COPB1P53618 953 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 RPL10AP62906 217 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 VEPH1Q14D04 833 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 TEAD2Q15562 447 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 TMEM270Q6UE05 265 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 OTOP3Q7RTS5 596 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 TFAP2BQ92481 460 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 MCRS1Q96EZ8 462 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 SMARCD1Q96GM5 515 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 C8orf48Q96LL4 319 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 HEXIM2Q96MH2 286 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 HNRNPABQ99729 332 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 RPP25Q9BUL9 199 aaKnown RBP8.34□□□□□ -1.07
SSR1-210ENST00000489567 SMOC2Q9H3U7 446 aa8.34□□□□□ -1.07
SSR1-210ENST00000489567 ACP6Q9NPH0 428 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms