RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 YAF2Q8IY57 180 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 FLCNQ8NFG4 579 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 MRPS31Q92665 395 aaKnown RBP14.24□□□□□ -0.13
CCL28-202ENST00000489442 E2F7Q96AV8 911 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 SRRTQ9BXP5 876 aaKnown RBP14.24□□□□□ -0.13
CCL28-202ENST00000489442 SDCBP2Q9H190 292 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 TASP1Q9H6P5 420 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 SLC2A4RGQ9NR83 387 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 LMBRD1Q9NUN5 540 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 EHD2Q9NZN4 543 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 MUC6Q6W4X9 2439 aa14.24□□□□□ -0.13
CCL28-202ENST00000489442 F8VP50 259 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 CLDN5O00501 218 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 OBSL1O75147 1896 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 AVPR1AP37288 418 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 NLRP12P59046 1061 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 ORC1Q13415 861 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 GRM2Q14416 872 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 TPD52L1Q16890 204 aaPredicted RBP14.23□□□□□ -0.13
CCL28-202ENST00000489442 CBWD6Q4V339 395 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 CBWD3Q5JTY5 395 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 CBWD5Q5RIA9 395 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 DENND5BQ6ZUT9 1274 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 ARID3BQ8IVW6 561 aaPredicted RBP14.23□□□□□ -0.13
CCL28-202ENST00000489442 MLKLQ8NB16 471 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 NUP210Q8TEM1 1887 aaPredicted RBP14.23□□□□□ -0.13
CCL28-202ENST00000489442 SEMA4DQ92854 862 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 SLC35C1Q96A29 364 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 TRMT2BQ96GJ1 504 aaKnown RBP14.23□□□□□ -0.13
CCL28-202ENST00000489442 SPATA17Q96L03 361 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 CEP295NLQ96MC4 621 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 TRMT61BQ9BVS5 477 aaKnown RBP14.23□□□□□ -0.13
CCL28-202ENST00000489442 NT5C1AQ9BXI3 368 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 B3GNT5Q9BYG0 378 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 BCO2Q9BYV7 579 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 PLA2G2FQ9BZM2 168 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 ZNF518BQ9C0D4 1074 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 BRD9Q9H8M2 597 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 TRPV4Q9HBA0 871 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 IL21Q9HBE4 155 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 APOBEC3GQ9HC16 384 aaKnown RBP14.23□□□□□ -0.13
CCL28-202ENST00000489442 ZMYM5Q9UJ78 669 aa14.23□□□□□ -0.13
CCL28-202ENST00000489442 HEPACAM2A8MVW5 462 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 LRRN2O75325 713 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 NOL4O94818 638 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 F11P03951 625 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 CCDC192P0DO97 292 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 PSMC3P17980 439 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 FCARP24071 287 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
CCL28-202ENST00000489442 CRYBG2Q8N1P7 616 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 TTC39CQ8N584 583 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 MAB21L3Q8N8X9 362 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 DEPDC1BQ8WUY9 529 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 FAXDC2Q96IV6 333 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 SHDQ96IW2 340 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 C8orf48Q96LL4 319 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 MYRFLQ96LU7 910 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 TRPC7Q9HCX4 862 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 ARHGEF3Q9NR81 526 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 RWDD2AQ9UIY3 292 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 F5P12259 2224 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 ANAPC1Q9H1A4 1944 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 WDFY4Q6ZS81 3184 aa14.22□□□□□ -0.13
CCL28-202ENST00000489442 ZNF263O14978 683 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 AP1G2O75843 785 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 GDI1P31150 447 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 FMO5P49326 533 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 INCA1Q0VD86 236 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 IFRD2Q12894 506 aaPredicted RBP14.21□□□□□ -0.13
CCL28-202ENST00000489442 TXNDC8Q6A555 127 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 ASTLQ6HA08 431 aaPredicted RBP14.21□□□□□ -0.13
CCL28-202ENST00000489442 VITQ6UXI7 678 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 FAM35AQ86V20 835 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 MFSD6LQ8IWD5 586 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 SLC2A14Q8TDB8 520 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 IRF7Q92985 503 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 TATDN2Q93075 761 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 SMARCD1Q96GM5 515 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 SLC46A2Q9BY10 475 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 FAM49BQ9NUQ9 324 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 HMGXB4Q9UGU5 601 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 RAPGEFL1Q9UHV5 662 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 COQ4Q9Y3A0 265 aa14.21□□□□□ -0.13
CCL28-202ENST00000489442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.21□□□□□ -0.13
CCL28-202ENST00000489442 KRBA1A5PL33 1030 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 CILPO75339 1184 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 ABL1P00519 1130 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 CCDC130P13994 396 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 ADORA2BP29275 332 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 AVPR2P30518 371 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 CLCN5P51795 746 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 YWHAEP62258 255 aaKnown RBP14.2□□□□□ -0.14
CCL28-202ENST00000489442 LRMPQ12912 555 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 SLC44A4Q53GD3 710 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 ZNF394Q53GI3 561 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 TMEM150AQ86TG1 271 aa14.2□□□□□ -0.14
CCL28-202ENST00000489442 MON1AQ86VX9 555 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms