RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 RUNDC1Q96C34 613 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 ATP6V0A4Q9HBG4 840 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 SERGEFQ9UGK8 458 aa5.95□□□□□ -1.46
PTPN4-212ENST00000488896 ARHGEF17Q96PE2 2063 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-212ENST00000488896 CFAP69A5D8W1 941 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 CAPN8A6NHC0 703 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 VNN1O95497 513 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 AGFG1P52594 562 aaKnown RBP5.94□□□□□ -1.46
PTPN4-212ENST00000488896 ARFIP2P53365 341 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 MGAT5BQ3V5L5 792 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 MINDY4Q4G0A6 757 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 PLA1AQ53H76 456 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 FAM102BQ5T8I3 360 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 CXorf57Q6NSI4 855 aaKnown RBP5.94□□□□□ -1.46
PTPN4-212ENST00000488896 SWSAP1Q6NVH7 229 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 MAEAQ7L5Y9 396 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 PTF1AQ7RTS3 328 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 SRRM1Q8IYB3 904 aaKnown RBP5.94□□□□□ -1.46
PTPN4-212ENST00000488896 IL31RAQ8NI17 732 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 TMEM171Q8WVE6 324 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 MACROD1Q9BQ69 325 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 MESP1Q9BRJ9 268 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 USP19O94966 1318 aa5.94□□□□□ -1.46
PTPN4-212ENST00000488896 A0A087WWL8 130 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 MARCH6O60337 910 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 ONECUT2O95948 504 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 PRKCGP05129 697 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 CSF1RP07333 972 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 CYP2C9P11712 490 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 XRCC6P12956 609 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTPN4-212ENST00000488896 PDE6CP51160 858 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 ATXN1P54253 815 aaKnown RBP5.93□□□□□ -1.46
PTPN4-212ENST00000488896 TFF2Q03403 129 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 FOXF2Q12947 444 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 GRM1Q13255 1194 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 NFE2Q16621 373 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-212ENST00000488896 LY6KQ17RY6 165 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 AARS2Q5JTZ9 985 aaKnown RBP5.93□□□□□ -1.46
PTPN4-212ENST00000488896 ANKRD16Q6P6B7 361 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 ZNF782Q6ZMW2 699 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-212ENST00000488896 OSCP1Q8WVF1 389 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 DUSP22Q9NRW4 184 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 SACM1LQ9NTJ5 587 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 ZSCAN32Q9NX65 697 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 TCEAL9Q9UHQ7 104 aa5.93□□□□□ -1.46
PTPN4-212ENST00000488896 WIPF3A6NGB9 483 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 ZNF213O14771 459 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 TBX3O15119 743 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 JTBO76095 146 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 PDE8BO95263 885 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 NHLRC4P0CG21 123 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 U2AF1L5P0DN76 240 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 CDK4P11802 303 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 KCNA3P22001 575 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 DGKEP52429 567 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 SUMO3P55854 103 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 WNT3P56703 355 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 CYP4F2P78329 520 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 U2AF1Q01081 240 aaKnown RBP eCLIP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 RAB32Q13637 225 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 MLC1Q15049 377 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 CNN3Q15417 329 aaKnown RBP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 DCAF12L1Q5VU92 463 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 PARS2Q7L3T8 475 aaKnown RBP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 WDR53Q7Z5U6 358 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 BPIFB1Q8TDL5 484 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 TBC1D5Q92609 795 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 PPP2R3CQ969Q6 453 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 DPCDQ9BVM2 203 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-212ENST00000488896 SLC29A3Q9BZD2 475 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 TMEM60Q9H2L4 133 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 CPNE7Q9UBL6 633 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 ADAMTS5Q9UNA0 930 aa5.92□□□□□ -1.46
PTPN4-212ENST00000488896 KAT6AQ92794 2004 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 CGB1A6NKQ9 187 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 LINC01548A6NM66 108 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 FAM227AF5H4B4 570 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 ERC2O15083 957 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 NPSP0C0P6 89 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 BRAFP15056 766 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 TPTEP56180 551 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 SRSF7Q16629 238 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPN4-212ENST00000488896 PTCHD3Q3KNS1 767 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 PPP4R4Q6NUP7 873 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 DPY19L3Q6ZPD9 716 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 ZNF804AQ7Z570 1209 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 MAGEB6Q8N7X4 407 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 REPS1Q96D71 796 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 C22orf23Q9BZE7 217 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 SMURF2Q9HAU4 748 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 GBA2Q9HCG7 927 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-212ENST00000488896 C1orf112Q9NSG2 853 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 DDX20Q9UHI6 824 aaKnown RBP5.91□□□□□ -1.46
PTPN4-212ENST00000488896 SH2B3Q9UQQ2 575 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 SNX14Q9Y5W7 946 aa5.91□□□□□ -1.46
PTPN4-212ENST00000488896 DNAJC9-AS1A6NH13 148 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 A6NNZ2 444 aa5.9□□□□□ -1.46
PTPN4-212ENST00000488896 ZKSCAN1P17029 563 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-212ENST00000488896 EN2P19622 333 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms