RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CDC42EP1Q00587 391 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 KRT17Q04695 432 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 UBE3AQ05086 875 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 GRIN1Q05586 938 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SNW1Q13573 536 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 KCNC3Q14003 757 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 TFDP1Q14186 410 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SMC1AQ14683 1233 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SMAD2Q15796 467 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 XP32Q5T750 250 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 EEF1DP3Q658K8 133 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ANKRD54Q6NXT1 300 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SYCE2Q6PIF2 218 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 MRPL10Q7Z7H8 261 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 PPFIBP1Q86W92 1011 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ADHFE1Q8IWW8 467 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SMRP1Q8NCR6 262 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ERMNQ8TAM6 284 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 HASPINQ8TF76 798 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 PPP2R3CQ969Q6 453 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 PGBD4Q96DM1 585 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 TMEM169Q96HH4 297 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 IGSF21Q96ID5 467 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 COX4I2Q96KJ9 171 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 RPGRIP1Q96KN7 1286 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 FAM193BQ96PV7 902 aaPredicted RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 PAAF1Q9BRP4 392 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 LRFN3Q9BTN0 628 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 MMTAG2Q9BU76 263 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 POLR3CQ9BUI4 534 aaPredicted RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ASPNQ9BXN1 380 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 MRPL9Q9BYD2 267 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 CSRNP2Q9H175 543 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ATP13A1Q9HD20 1204 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 TUFT1Q9NNX1 390 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SNTG2Q9NY99 539 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 DBR1Q9UK59 544 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SLC5A6Q9Y289 635 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SNX11Q9Y5W9 270 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 HCFC2Q9Y5Z7 792 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 OAS3Q9Y6K5 1087 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 TRIP11Q15643 1979 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 SHISA3A0PJX4 238 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 VWA3AA6NCI4 1184 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 ARL5CA6NH57 179 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 CASTOR2A6NHX0 329 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 PI4K2BG5E9Z4 385 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 H3BQV1 296 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 HIP1RO75146 1068 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 EYA4O95677 639 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 PRKCBP05771 671 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 RPL17P18621 184 aaKnown RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 CYP11B2P19099 503 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 GUCY2CP25092 1073 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 PPM1AP35813 382 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 OSTNP61366 133 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 COASYQ13057 564 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 MXD4Q14582 209 aaPredicted RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 PTPN14Q15678 1187 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 GLRA4Q5JXX5 417 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 RARS2Q5T160 578 aaKnown RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 FAM173BQ6P4H8 233 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 NOTUMQ6P988 496 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 UNC5AQ6ZN44 842 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 EXOC8Q8IYI6 725 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 COLGALT2Q8IYK4 626 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 TAB3Q8N5C8 712 aaPredicted RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 MRPL43Q8N983 215 aaKnown RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 GSTCDQ8NEC7 633 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 ST13P5Q8NFI4 369 aaPredicted RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 URGCPQ8TCY9 931 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 LRRC15Q8TF66 581 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 MISP3Q96FF7 219 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 FBXL18Q96ME1 805 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 TM9SF2Q99805 663 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 TRIM6Q9C030 488 aaPredicted RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 DUSP15Q9H1R2 295 aaPredicted RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 S1PR5Q9H228 398 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 SMOC2Q9H3U7 446 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 PDZD7Q9H5P4 517 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 UPF2Q9HAU5 1272 aaKnown RBP6.5□□□□□ -1.37
CDHR3-213ENST00000488386 SMC3Q9UQE7 1217 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 LZTS1Q9Y250 596 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 FAN1Q9Y2M0 1017 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 GDAQ9Y2T3 454 aa6.5□□□□□ -1.37
CDHR3-213ENST00000488386 MYH11P35749 1972 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 C2orf16Q68DN1 1984 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 A0A1B0GUA9 196 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 VPS37CA5D8V6 355 aaPredicted RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CCDC169A6NNP5 214 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 NCK2O43639 380 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CLEC3AO75596 197 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 ALDH2P05091 517 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CNPP09543 421 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 SPATA31D3P0C874 917 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CTSAP10619 480 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 HARSP12081 509 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 TRAPPC10P48553 1259 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 PEX3P56589 373 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms