RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 XYLT1Q86Y38 959 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CPNE8Q86YQ8 564 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 FUKQ8N0W3 1084 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CRIPAKQ8N1N5 446 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 THEM5Q8N1Q8 247 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 LRRN4CLQ8ND94 238 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 OR10T2Q8NGX3 314 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 MYCBPAPQ8TBZ2 947 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 BCL7CQ8WUZ0 217 aaPredicted RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 BADQ92934 168 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 C18orf8Q96DM3 657 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 SMARCD1Q96GM5 515 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 VCPIP1Q96JH7 1222 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 B3GALT6Q96L58 329 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 OSBPL9Q96SU4 736 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 HNRNPABQ99729 332 aaKnown RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 RTP3Q9BQQ7 232 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 COLEC11Q9BWP8 271 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CARD6Q9BX69 1037 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 TLR10Q9BXR5 811 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 B3GNT5Q9BYG0 378 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 RHOBTB2Q9BYZ6 727 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 TRIM7Q9C029 511 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 MIS12Q9H081 205 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 PARVAQ9NVD7 372 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 CDC23Q9UJX2 597 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 ZMYND8Q9ULU4 1186 aaPredicted RBP7.3□□□□□ -1.24
PDAP1-203ENST00000488214 USTQ9Y2C2 406 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 FAN1Q9Y2M0 1017 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 SAR1BQ9Y6B6 198 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 GREB1Q4ZG55 1949 aa7.3□□□□□ -1.24
PDAP1-203ENST00000488214 TCRBV5S1A1TA0A578 114 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 MYO1FO00160 1098 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 XPO1O14980 1071 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SYN3O14994 580 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 ZNF185O15231 689 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 DGKIO75912 1065 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SLU7O95391 586 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 OR4Q2P0C623 313 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 LCP1P13796 627 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SYN1P17600 705 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 TCP1P17987 556 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 PSMA2P25787 234 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 CXCR5P32302 372 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SSR1P43307 286 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 PLA2G4AP47712 749 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 MARCKSL1P49006 195 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 RABGGTBP53611 331 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 GSCP56915 257 aaPredicted RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 MAP3K7CLP57077 242 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SNX16P57768 344 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 RPL7AP62424 266 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 TAP1Q03518 808 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 ADIGQ0VDE8 80 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 ELAVL2Q12926 359 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 BTG3Q14201 252 aaPredicted RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 CTXN3Q4LDR2 81 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SLC39A12Q504Y0 691 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 VARS2Q5ST30 1063 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 DAB2IPQ5VWQ8 1189 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 PMF1Q6P1K2 205 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 PSRC1Q6PGN9 363 aaPredicted RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 CLEC20AQ6ZU45 233 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SLFN11Q7Z7L1 901 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SIX6OS1Q8N1H7 587 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 EMC1Q8N766 993 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 ANKRD52Q8NB46 1076 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 MYRIPQ8NFW9 859 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 JOSD2Q8TAC2 188 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 FEZF2Q8TBJ5 459 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 COG1Q8WTW3 980 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 PCED1BQ96HM7 432 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 PIWIL1Q96J94 861 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 TMEM209Q96SK2 561 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 YME1L1Q96TA2 773 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 ACBD6Q9BR61 282 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 RC3H2Q9HBD1 1191 aaKnown RBP7.29□□□□□ -1.24
PDAP1-203ENST00000488214 SMARCAL1Q9NZC9 954 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 EHD2Q9NZN4 543 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 WDR35Q9P2L0 1181 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 ALG6Q9Y672 507 aa7.29□□□□□ -1.24
PDAP1-203ENST00000488214 MIF4GDA9UHW6 222 aaKnown RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 PAPSS1O43252 624 aaPredicted RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 CEP104O60308 925 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 GRAP2O75791 330 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 PROSCO94903 275 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ALDH2P05091 517 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 GALTP07902 379 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 KRT3P12035 628 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 CPB1P15086 417 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 LAG3P18627 525 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 GPD1P21695 349 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 MAN1A1P33908 653 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 GABRB2P47870 512 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ALDH7A1P49419 539 aaKnown RBP7.28□□□□□ -1.24
PDAP1-203ENST00000488214 CACNA2D1P54289 1103 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 ARPP19P56211 112 aa7.28□□□□□ -1.24
PDAP1-203ENST00000488214 RNASE9P60153 205 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms