RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 PCDHGA2Q9Y5H1 932 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TNRC6BQ9UPQ9 1833 aaKnown RBP12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 OTOL1A6NHN0 477 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DPYSL4O14531 572 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NCAM2O15394 837 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TACC1O75410 805 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NDUFA8P51970 172 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MYL6P60660 151 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 USP46P62068 366 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 RPL10AP62906 217 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PLCB2Q00722 1185 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SATB1Q01826 763 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CSTF1Q05048 431 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZNF268Q14587 947 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZNF77Q15935 545 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TAF12Q16514 161 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TRIM68Q6AZZ1 485 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 C1orf228Q6PIY5 440 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MON1AQ86VX9 555 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 RALGPS2Q86X27 583 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SLC9A9Q8IVB4 645 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CELF5Q8N6W0 485 aaKnown RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TTC8Q8TAM2 541 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PARD3BQ8TEW8 1205 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GOLPH3LQ9H4A5 285 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SMYD3Q9H7B4 428 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 C8orf33Q9H7E9 229 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 KIF9Q9HAQ2 790 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 C2orf42Q9NWW7 574 aa11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 UXTQ9UBK9 157 aaPredicted RBP11.99□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SOBPA7XYQ1 873 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 EXOC3O60645 756 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 KINO60870 393 aaKnown RBP11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 VNN1O95497 513 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NR3C1P04150 777 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 RPN1P04843 607 aaKnown RBP11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MYL1P05976 194 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 BDNFP23560 247 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 AVPR1AP37288 418 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TNNC1P63316 161 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DLG4P78352 724 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PON2Q15165 354 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 WDR72Q3MJ13 1102 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MDH1BQ5I0G3 518 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 C1orf220Q5T0J3 134 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 VSTM1Q6UX27 236 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 C4orf50Q6ZRC1 276 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GOLGA5Q8TBA6 731 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MYCBPAPQ8TBZ2 947 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MRPS31Q92665 395 aaKnown RBP11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ELMO3Q96BJ8 720 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SPATA17Q96L03 361 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MMS19Q96T76 1030 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TTLL2Q9BWV7 592 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 EPC1Q9H2F5 836 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LMAN1LQ9HAT1 526 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TDP1Q9NUW8 608 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZSCAN32Q9NX65 697 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GCNT4Q9P109 453 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 USP25Q9UHP3 1055 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NUP205Q92621 2012 aa11.98□□□□□ -0.49
RAB11FIP3-210ENST00000487899 C2orf78A6NCI8 922 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 F8VP50 259 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PAPSS2O95340 614 aaPredicted RBP11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PDGFRBP09619 1106 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ARSAP15289 507 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 HOXC13P31276 330 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SYKP43405 635 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 RAP1GAPP47736 663 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CCR3P51677 355 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 KPNA1P52294 538 aaPredicted RBP11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CYP27A1Q02318 531 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FAM160A1Q05DH4 1040 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DPYDQ12882 1025 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PSMD2Q13200 908 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MTF1Q14872 753 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MAPRE1Q15691 268 aaKnown RBP11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZNF699Q32M78 642 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ITPRIPL2Q3MIP1 535 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NAIF1Q69YI7 327 aaPredicted RBP11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PKN3Q6P5Z2 889 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SCARA5Q6ZMJ2 495 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 B3GALNT2Q8NCR0 500 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SYAP1Q96A49 352 aaPredicted RBP11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CEP295NLQ96MC4 621 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZNF518BQ9C0D4 1074 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SDCBP2Q9H190 292 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 EBF3Q9H4W6 596 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GDPD2Q9HCC8 539 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TRPC7Q9HCX4 862 aa11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SMG5Q9UPR3 1016 aaKnown RBP11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 R3HCC1Q9Y3T6 440 aaKnown RBP11.97□□□□□ -0.49
RAB11FIP3-210ENST00000487899 A0A1W2PQ27 194 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 A0A1W2PQ64 194 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 A0A1W2PQD8 194 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 K7ESF4 209 aa11.96□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PDXKO00764 312 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms