RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 OSMP13725 252 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 GPR3P46089 330 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 CLRN1P58418 232 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 COL10A1Q03692 680 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 PRKCZQ05513 592 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 NOMO1Q15155 1222 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 SUPT20HL1Q3ZLR7 823 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 DACT2Q5SW24 774 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 FAM102AQ5T9C2 384 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-217ENST00000487825 FAM180AQ6UWF9 173 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 ZNF572Q7Z3I7 529 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-217ENST00000487825 MORC1Q86VD1 984 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 PLXDC1Q8IUK5 500 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 PQLC1Q8N2U9 271 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 BEND2Q8NDZ0 799 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 CPEB3Q8NE35 698 aaKnown RBP5.85□□□□□ -1.47
BRCA1-217ENST00000487825 ATL2Q8NHH9 583 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 LRFN3Q9BTN0 628 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 FAM126AQ9BYI3 521 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-217ENST00000487825 SERHL2Q9H4I8 314 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 CYP4F11Q9HBI6 524 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 RBM12Q9NTZ6 932 aaKnown RBP5.85□□□□□ -1.47
BRCA1-217ENST00000487825 SCOCQ9UIL1 159 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 RLFQ13129 1914 aa5.85□□□□□ -1.47
BRCA1-217ENST00000487825 C5orf42Q9H799 3197 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 GAGE12BA1L429 117 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 GRID2IPA4D2P6 1211 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 GAGE12HA6NDE8 117 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 DIRC3C9JPN6 131 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 B3GALT2O43825 422 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 SPATA31D3P0C874 917 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 GSPT1P15170 499 aaKnown RBP5.84□□□□□ -1.47
BRCA1-217ENST00000487825 ALOX15P16050 662 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-217ENST00000487825 BMP5P22003 454 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 PROZP22891 400 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 ZEB1P37275 1124 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-217ENST00000487825 NANOS3P60323 173 aaKnown RBP5.84□□□□□ -1.47
BRCA1-217ENST00000487825 PPP3CAQ08209 521 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 FAPQ12884 760 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 SF3B3Q15393 1217 aaKnown RBP5.84□□□□□ -1.47
BRCA1-217ENST00000487825 BEAN1Q3B7T3 259 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 AFMIDQ63HM1 303 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 METRNLQ641Q3 311 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 SPATA31D4Q6ZUB0 917 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 ASB2Q96Q27 587 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 SLC2A13Q96QE2 648 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 NEU1Q99519 415 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 MRI1Q9BV20 369 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 ADI1Q9BV57 179 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 MXD3Q9BW11 206 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 C11orf49Q9H6J7 331 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 CCM2LQ9NUG4 571 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-217ENST00000487825 PACSIN3Q9UKS6 424 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 RRP7AQ9Y3A4 280 aaKnown RBP5.84□□□□□ -1.47
BRCA1-217ENST00000487825 PCDHGA2Q9Y5H1 932 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 LRRC37A2A6NM11 1700 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 COL4A3Q01955 1670 aa5.84□□□□□ -1.47
BRCA1-217ENST00000487825 GBF1Q92538 1859 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 PLXNA1Q9UIW2 1896 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 ATRNL1Q5VV63 1379 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 MED23Q9ULK4 1368 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 PFASO15067 1338 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 BTBD19C9JJ37 291 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 PJA2O43164 708 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 RAP2AP10114 183 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 MYL6BP14649 208 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 SREBF1P36956 1147 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 MCAMP43121 646 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 MALLQ13021 153 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 ANO4Q32M45 955 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 RRP12Q5JTH9 1297 aaKnown RBP5.83□□□□□ -1.48
BRCA1-217ENST00000487825 HECTD2Q5U5R9 776 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 STRIP1Q5VSL9 837 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 SPATS2Q86XZ4 545 aaKnown RBP5.83□□□□□ -1.48
BRCA1-217ENST00000487825 ARHGEF19Q8IW93 802 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 CMTR2Q8IYT2 770 aaKnown RBP5.83□□□□□ -1.48
BRCA1-217ENST00000487825 LCORLQ8N3X6 602 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 SENP6Q9GZR1 1112 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-217ENST00000487825 THEGQ9P2T0 379 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 TRMT112Q9UI30 125 aaKnown RBP5.83□□□□□ -1.48
BRCA1-217ENST00000487825 CPA4Q9UI42 421 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 GABRQQ9UN88 632 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 FPGT-TNNI3KV9GXZ4 949 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 CHD9Q3L8U1 2897 aa5.83□□□□□ -1.48
BRCA1-217ENST00000487825 ZDBF2Q9HCK1 2354 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 CHD7Q9P2D1 2997 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 HLA-DOAP06340 250 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 CETPP11597 493 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 DDX6P26196 483 aaKnown RBP eCLIP5.82□□□□□ -1.48
BRCA1-217ENST00000487825 SLC5A3P53794 718 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 RPS8P62241 208 aaKnown RBP5.82□□□□□ -1.48
BRCA1-217ENST00000487825 GUCY1B3Q02153 619 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 VGLL4Q14135 290 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 HSP90AB3PQ58FF7 597 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 TSHZ3Q63HK5 1081 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 MED25Q71SY5 747 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 HOXB13Q92826 284 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-217ENST00000487825 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.82□□□□□ -1.48
BRCA1-217ENST00000487825 LANCL2Q9NS86 450 aa5.82□□□□□ -1.48
BRCA1-217ENST00000487825 AJAP1Q9UKB5 411 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms