RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 PCED1BQ96HM7 432 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 DUSP9Q99956 384 aaKnown RBP10.88□□□□□ -0.67
NEK4-204ENST00000487068 ELOVL4Q9GZR5 314 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 MFSD1Q9H3U5 465 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 ZNF334Q9HCZ1 680 aaPredicted RBP10.88□□□□□ -0.67
NEK4-204ENST00000487068 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 FAM49BQ9NUQ9 324 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 RAB20Q9NX57 234 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 GDE1Q9NZC3 331 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 RWDD2AQ9UIY3 292 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
NEK4-204ENST00000487068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEK4-204ENST00000487068 TRIOO75962 3097 aa10.88□□□□□ -0.67
NEK4-204ENST00000487068 CLDN5O00501 218 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 NARSO43776 548 aaKnown RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 CFHP08603 1231 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 AVPR2P30518 371 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 MTIF2P46199 727 aaKnown RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 FMO5P49326 533 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 NDST1P52848 882 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 VCPP55072 806 aaKnown RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 NLRP12P59046 1061 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 FOXK2Q01167 660 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 LRMPQ12912 555 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 HTR4Q13639 388 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 ZNF394Q53GI3 561 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 PRSS36Q5K4E3 855 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 GPR158Q5T848 1215 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 FAM171BQ6P995 826 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 SASS6Q6UVJ0 657 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 PARM1Q6UWI2 310 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 VSTM1Q6UX27 236 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 LIMS2Q7Z4I7 341 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 FAM35AQ86V20 835 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 TMC8Q8IU68 726 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 SHKBP1Q8TBC3 707 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 ZSCAN18Q8TBC5 510 aaPredicted RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 ATOH1Q92858 354 aaPredicted RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 FGF14Q92915 247 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 NXPE3Q969Y0 559 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 SLC35C1Q96A29 364 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 ASIC4Q96FT7 647 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 CNOT6LQ96LI5 555 aaKnown RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 PKMYT1Q99640 499 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 SDCBP2Q9H190 292 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 APOBEC3GQ9HC16 384 aaKnown RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 AVENQ9NQS1 362 aaPredicted RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 KRT82Q9NSB4 513 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
NEK4-204ENST00000487068 HMGXB4Q9UGU5 601 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 DUSP12Q9UNI6 340 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 USP34Q70CQ2 3546 aa10.87□□□□□ -0.67
NEK4-204ENST00000487068 ZDBF2Q9HCK1 2354 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 SLC38A8A6NNN8 435 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 F8VP50 259 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 PES1O00541 588 aaKnown RBP10.86□□□□□ -0.67
NEK4-204ENST00000487068 DPYSL4O14531 572 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 LRRN2O75325 713 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 FAM163BP0C2L3 166 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 CCDC130P13994 396 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 ADORA2BP29275 332 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 MAGEA11P43364 429 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 EPHA5P54756 1037 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 YWHAEP62258 255 aaKnown RBP10.86□□□□□ -0.67
NEK4-204ENST00000487068 HSP90AA4PQ58FG1 418 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 STXBP5Q5T5C0 1151 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 FOXR2Q6PJQ5 311 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 UNC93AQ86WB7 457 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 FAM114A1Q8IWE2 563 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 YAF2Q8IY57 180 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 MRPS31Q92665 395 aaKnown RBP10.86□□□□□ -0.67
NEK4-204ENST00000487068 SEMA4DQ92854 862 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 JAKMIP2Q96AA8 810 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 SMARCD1Q96GM5 515 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 NT5C1BQ96P26 610 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 ARID3AQ99856 593 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 NT5C1AQ9BXI3 368 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 BCO2Q9BYV7 579 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 ZNF518BQ9C0D4 1074 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 GPR88Q9GZN0 384 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 CYP3A43Q9HB55 503 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 ZFP14Q9HCL3 533 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 TRPC7Q9HCX4 862 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 CA14Q9ULX7 337 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 NME7Q9Y5B8 376 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 COL4A2P08572 1712 aa10.86□□□□□ -0.67
NEK4-204ENST00000487068 ANHXE9PGG2 379 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 AP1G2O75843 785 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 MICAL2O94851 1124 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 ABL1P00519 1130 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 AFPP02771 609 aaKnown RBP10.85□□□□□ -0.67
NEK4-204ENST00000487068 SRFP11831 508 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 TBXAS1P24557 533 aaPredicted RBP10.85□□□□□ -0.67
NEK4-204ENST00000487068 AVPR1AP37288 418 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 KCNH2Q12809 1159 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 GRM2Q14416 872 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 FAM78AQ5JUQ0 283 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 CCDC183Q5T5S1 534 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 DENND5BQ6ZUT9 1274 aa10.85□□□□□ -0.67
NEK4-204ENST00000487068 GAREM2Q75VX8 874 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms