RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	CRISPLD1	Q9H336	500 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	COQ4	Q9Y3A0	265 aa		13.96	□□□□□ -0.17
NR1H3-223	ENST00000486991	CACNA1A	O00555	2505 aa		13.96	□□□□□ -0.18
NR1H3-223	ENST00000486991	FANCM	Q8IYD8	2048 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	LRG1	P02750	347 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	CYP11A1	P05108	521 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	RHO	P08100	348 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	OR4Q2	P0C623	313 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	KLK7	P49862	253 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	CSTF1	Q05048	431 aa	Known RBP	13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	KCNMA1	Q12791	1236 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	MYO1E	Q12965	1108 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	SGSM1	Q2NKQ1	1148 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	ZNF699	Q32M78	642 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	TANGO2	Q6ICL3	276 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	TSSK4	Q6SA08	328 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	DSTYK	Q6XUX3	929 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	MTSS1L	Q765P7	747 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	LRRC52	Q8N7C0	313 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	SUMF1	Q8NBK3	374 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	TCEAL4	Q96EI5	215 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	HPDL	Q96IR7	371 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	SHD	Q96IW2	340 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	ZNF560	Q96MR9	790 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	ERGIC2	Q96RQ1	377 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	SEMA4A	Q9H3S1	761 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	MRPS23	Q9Y3D9	190 aa	Known RBP	13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	COL4A2	P08572	1712 aa		13.95	□□□□□ -0.18
NR1H3-223	ENST00000486991	PATJ	Q8NI35	1801 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	SHISA7	A6NL88	538 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	PRRG1	O14668	218 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	ADCY5	O95622	1261 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	TARS	P26639	723 aa	Known RBP	13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	PON1	P27169	355 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	ATIC	P31939	592 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	TAF6	P49848	677 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	APBA1	Q02410	837 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	YWHAH	Q04917	246 aa	Predicted RBP	13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	SV2C	Q496J9	727 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	OVOS1	Q6IE37	1185 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	SPOPL	Q6IQ16	392 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	TRIM65	Q6PJ69	517 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	RNF19B	Q6ZMZ0	732 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	TPRG1	Q6ZUI0	275 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	ELMOD1	Q8N336	334 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	NEK11	Q8NG66	645 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	OR10T2	Q8NGX3	314 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	LMO3	Q8TAP4	145 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	TAF4B	Q92750	862 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	TMEM209	Q96SK2	561 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	LTB4R2	Q9NPC1	389 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	HEBP1	Q9NRV9	189 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	AFF4	Q9UHB7	1163 aa	Known RBP	13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	SIK3	Q9Y2K2	1263 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	INSL5	Q9Y5Q6	135 aa		13.94	□□□□□ -0.18
NR1H3-223	ENST00000486991	KIF26A	Q9ULI4	1882 aa	Predicted RBP	13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	ZNF638	Q14966	1978 aa	Known RBP	13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991		A0A1W2PQC6	194 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	OR6C75	A6NL08	312 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	LAMTOR5	O43504	91 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	ASS1	P00966	412 aa	Known RBP	13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	ODC1	P11926	461 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	PNPLA4	P41247	253 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	CCR2	P41597	374 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	NOP14	P78316	857 aa	Known RBP	13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	PRKCQ	Q04759	706 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	GRM2	Q14416	872 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	ZNF667	Q5HYK9	610 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	PRSS36	Q5K4E3	855 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	HS6ST3	Q8IZP7	471 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	TTC9B	Q8N6N2	239 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	RUBCN	Q92622	972 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	MRFAP1L1	Q96HT8	127 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	NT5C1B	Q96P26	610 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	CORO1B	Q9BR76	489 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	BCO2	Q9BYV7	579 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	XYLT2	Q9H1B5	865 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	AVEN	Q9NQS1	362 aa	Predicted RBP	13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	NXF1	Q9UBU9	619 aa	Known RBP	13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	DSE	Q9UL01	958 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	OTOGL	Q3ZCN5	2332 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	ANAPC1	Q9H1A4	1944 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	GPR179	Q6PRD1	2367 aa		13.93	□□□□□ -0.18
NR1H3-223	ENST00000486991	KPNA7	A9QM74	516 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	ZNF197	O14709	1029 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	STAU1	O95793	577 aa	Known RBP	13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	CPB1	P15086	417 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	GJA1	P17302	382 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	PTPN2	P17706	415 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	FCAR	P24071	287 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	PBX1	P40424	430 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	TNNC1	P63316	161 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	ADCY1	Q08828	1119 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	GPR17	Q13304	367 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	FZD5	Q13467	585 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	WDR72	Q3MJ13	1102 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	WSCD1	Q658N2	575 aa		13.92	□□□□□ -0.18
NR1H3-223	ENST00000486991	IQCE	Q6IPM2	695 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms