RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 BAG2O95816 211 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 CFHP08603 1231 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 SSTR1P30872 391 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 CFAP61Q8NHU2 1237 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 ADAM32Q8TC27 787 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 CRYGNQ8WXF5 182 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 AVENQ9NQS1 362 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-216ENST00000486741 M0QYT0 321 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 DFFAO00273 331 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 KRT38O76015 456 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 ASS1P00966 412 aaKnown RBP13.83□□□□□ -0.2
HMGN1-216ENST00000486741 CD4P01730 458 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 NCAM1P13591 858 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 THPOP40225 353 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 BZW1Q7L1Q6 419 aaKnown RBP13.83□□□□□ -0.2
HMGN1-216ENST00000486741 KIF2BQ8N4N8 673 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 ABHD16BQ9H3Z7 469 aa13.83□□□□□ -0.2
HMGN1-216ENST00000486741 PPARGC1AQ9UBK2 798 aaKnown RBP13.83□□□□□ -0.2
HMGN1-216ENST00000486741 FAM47DPA6NHR8 397 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 CASTOR2A6NHX0 329 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 ARIH2O95376 493 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 C4BPAP04003 597 aaKnown RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 ARF4P18085 180 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 KRT4P19013 534 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 CHKAP35790 457 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 GARSP41250 739 aaKnown RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 NFIL3Q16649 462 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 CDKL3Q8IVW4 592 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 IQCKQ8N0W5 287 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 LENG1Q96BZ8 264 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 ETNK1Q9HBU6 452 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 TXNRD2Q9NNW7 524 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 HAUS2Q9NVX0 235 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 WHRNQ9P202 907 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 BARX2Q9UMQ3 279 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 ANKRD36CQ5JPF3 1778 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 FOXO6A8MYZ6 492 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 AGPSO00116 658 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 BANF1O75531 89 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 LSM8O95777 96 aaKnown RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 TPI1P60174 286 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 TSPY1Q01534 308 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 SLC39A4Q6P5W5 647 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 SPATA21Q7Z572 469 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 ZNF518BQ9C0D4 1074 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 NOCTQ9UK39 431 aaKnown RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 SSX2IPQ9Y2D8 614 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 RECQL4O94761 1208 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 HMBSP08397 361 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 MCF2P10911 925 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 OVGP1Q12889 678 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 DUPD1Q68J44 220 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 RSRC1Q96IZ7 334 aaKnown RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 ACTR5Q9H9F9 607 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 NPHS2Q9NP85 383 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 TLK1Q9UKI8 766 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 NAALADL1Q9UQQ1 740 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 MAFBQ9Y5Q3 323 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-216ENST00000486741 C4AP0C0L4 1744 aa13.82□□□□□ -0.2
HMGN1-216ENST00000486741 C17orf102A2RUQ5 167 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 H3BRJ5 948 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CYB561D2O14569 222 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CRCPO75575 148 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CCDC130P13994 396 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 GRIK1P39086 918 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 STILQ15468 1287 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 BOLA3Q53S33 107 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 FBXO47Q5MNV8 452 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 MROH9Q5TGP6 573 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 THEM5Q8N1Q8 247 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 RYBPQ8N488 228 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-216ENST00000486741 PPFIBP2Q8ND30 876 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 JOSD2Q8TAC2 188 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 LRRC37BQ96QE4 947 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CNPY3Q9BT09 278 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 TRIM55Q9BYV6 548 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CHD4Q14839 1912 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CFAP69A5D8W1 941 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 RTP1P59025 263 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 MMRN1Q13201 1228 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 NPNTQ6UXI9 565 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 RFX8Q6ZV50 586 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 TMEM192Q8IY95 271 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 TINF2Q9BSI4 451 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 SYT17Q9BSW7 474 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 NCF2P19878 526 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-216ENST00000486741 GCKP35557 465 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 ARL2P36404 184 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 NR1H3Q13133 447 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 PTK7Q13308 1070 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 LVRNQ6Q4G3 990 aa13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CCDC117Q8IWD4 279 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-216ENST00000486741 CCDC97Q96F63 343 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-216ENST00000486741 ROPN1BQ9BZX4 212 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms