RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SCUBE3Q8IX30 993 aa10.62□□□□□ -0.71
SND1-213ENST00000486037 APPL2Q8NEU8 664 aa10.62□□□□□ -0.71
SND1-213ENST00000486037 GIPC2Q8TF65 315 aa10.62□□□□□ -0.71
SND1-213ENST00000486037 NAP1L4Q99733 375 aaKnown RBP10.62□□□□□ -0.71
SND1-213ENST00000486037 DDX19AQ9NUU7 478 aaKnown RBP10.62□□□□□ -0.71
SND1-213ENST00000486037 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
SND1-213ENST00000486037 MMP17Q9ULZ9 603 aa10.62□□□□□ -0.71
SND1-213ENST00000486037 ASB3Q9Y575 518 aa10.62□□□□□ -0.71
SND1-213ENST00000486037 WNT6Q9Y6F9 365 aa10.62□□□□□ -0.71
SND1-213ENST00000486037 ZNF638Q14966 1978 aaKnown RBP10.62□□□□□ -0.71
SND1-213ENST00000486037 MUC22E2RYF6 1773 aaPredicted RBP10.62□□□□□ -0.71
SND1-213ENST00000486037 NBPF19A0A087WUL8 3843 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 FAM149AA5PLN7 773 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 M0QZQ0 153 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 SGK1O00141 431 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 KCNE1P15382 129 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 OPRD1P41143 372 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 YWHAHQ04917 246 aaPredicted RBP10.61□□□□□ -0.71
SND1-213ENST00000486037 HNRNPDQ14103 355 aaKnown RBP10.61□□□□□ -0.71
SND1-213ENST00000486037 CALCRLQ16602 461 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 GAB4Q2WGN9 574 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 DTHD1Q6ZMT9 781 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 EPSTI1Q96J88 318 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 NUP62CLQ9H1M0 184 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 C2orf40Q9H1Z8 148 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 CLSTN2Q9H4D0 955 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 CNTN3Q9P232 1028 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 PCDHB9Q9Y5E1 797 aa10.61□□□□□ -0.71
SND1-213ENST00000486037 A0A087X0B3 334 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 PP2D1A8MPX8 630 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 ABLIM1O14639 778 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 MARCH6O60337 910 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 TADA3O75528 432 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 FGF19O95750 216 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 F11P03951 625 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 CDC25CP30307 473 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 RPL9P32969 192 aaKnown RBP10.6□□□□□ -0.71
SND1-213ENST00000486037 LONP1P36776 959 aaKnown RBP10.6□□□□□ -0.71
SND1-213ENST00000486037 TXKP42681 527 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 BFSP1Q12934 665 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 MTF1Q14872 753 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 EML3Q32P44 896 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 SEZ6Q53EL9 994 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 EMC10Q5UCC4 262 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 SLC41A1Q8IVJ1 513 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 ALLCQ8N6M5 410 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 TXNDC5Q8NBS9 432 aaKnown RBP10.6□□□□□ -0.71
SND1-213ENST00000486037 TTC16Q8NEE8 873 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 OR10T2Q8NGX3 314 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 DEPTORQ8TB45 409 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 SYAP1Q96A49 352 aaPredicted RBP10.6□□□□□ -0.71
SND1-213ENST00000486037 CCDC43Q96MW1 224 aaKnown RBP10.6□□□□□ -0.71
SND1-213ENST00000486037 SEPT5Q99719 369 aaPredicted RBP10.6□□□□□ -0.71
SND1-213ENST00000486037 LINC00597Q9H2U6 94 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 PTPRHQ9HD43 1115 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 TDP1Q9NUW8 608 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 SLC38A7Q9NVC3 462 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 FAM13BQ9NYF5 915 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 PCOLCE2Q9UKZ9 415 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 PIEZO2Q9H5I5 2752 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 CITO14578 2027 aa10.6□□□□□ -0.71
SND1-213ENST00000486037 PTPN13Q12923 2485 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 TSC2P49815 1807 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 SYCE3A1L190 88 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 OR6C75A6NL08 312 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 PPEF2O14830 753 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 ADAM23O75077 832 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 ZNF202O95125 648 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 KLF8O95600 359 aaPredicted RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 ATXN1LP0C7T5 689 aaKnown RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 SPATA31C1P0DKV0 1188 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 HMGA1P17096 107 aaKnown RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 CDC25AP30304 524 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 AVPR1AP37288 418 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 SYKP43405 635 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 NAMPTP43490 491 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 GPR15P49685 360 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 FXR2P51116 673 aaKnown RBP eCLIP10.59□□□□□ -0.714e-13■■■■□ 23.5
SND1-213ENST00000486037 GUCY2FP51841 1108 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 YARSP54577 528 aaKnown RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 NLRP12P59046 1061 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 ZNF445P59923 1031 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 AMPD2Q01433 879 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 SPAG1Q07617 926 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 GSE1Q14687 1217 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 PDGFRLQ15198 375 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 ZNF77Q15935 545 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 CAMK4Q16566 473 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 GLRX5Q86SX6 157 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 ITIH5Q86UX2 942 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 CPA6Q8N4T0 437 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 IL17RCQ8NAC3 791 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 CEP76Q8TAP6 659 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 WHAMMQ8TF30 809 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 OSCP1Q8WVF1 389 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 HMGB4Q8WW32 186 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 RNF25Q96BH1 459 aaPredicted RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 SPACA7Q96KW9 195 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 SLC22A12Q96S37 553 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms