RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TMEM35BQ8NCS4 154 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 MNS1Q8NEH6 495 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 MYCBPAPQ8TBZ2 947 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 SLC35F5Q8WV83 523 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 PIK3R5Q8WYR1 880 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 ARHGEF26Q96DR7 871 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 PCED1BQ96HM7 432 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 PDCL3Q9H2J4 239 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 TMEM30AQ9NV96 361 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 SEPT11Q9NVA2 429 aaKnown RBP11.98□□□□□ -0.49
SND1-212ENST00000485871 SPG21Q9NZD8 308 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 MTRRQ9UBK8 725 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 GTF3C4Q9UKN8 822 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 ZNF638Q14966 1978 aaKnown RBP11.98□□□□□ -0.49
SND1-212ENST00000485871 CTAGE9A4FU28 777 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 EFCAB8A8MWE9 144 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 GRXCR1A8MXD5 290 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 M0QYV0 167 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 TULP2O00295 520 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 CLDN5O00501 218 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 TLL1O43897 1013 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 URI1O94763 535 aaPredicted RBP11.97□□□□□ -0.49
SND1-212ENST00000485871 H2AFZP0C0S5 128 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 OR4Q2P0C623 313 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 SETSIPP0DME0 302 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 PPM1AP35813 382 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 RABGGTBP53611 331 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 CACNA2D1P54289 1103 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 GSCP56915 257 aaPredicted RBP11.97□□□□□ -0.49
SND1-212ENST00000485871 PDE4CQ08493 712 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 SPOUT1Q5T280 376 aaKnown RBP11.97□□□□□ -0.49
SND1-212ENST00000485871 H2AFVQ71UI9 128 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 KIAA1328Q86T90 577 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 DDX53Q86TM3 631 aaKnown RBP11.97□□□□□ -0.49
SND1-212ENST00000485871 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 MCOLN2Q8IZK6 566 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 ANKRD52Q8NB46 1076 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 ZMIZ2Q8NF64 920 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 UBA3Q8TBC4 463 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 SLC2A14Q8TDB8 520 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 CPA5Q8WXQ8 436 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 PPM1EQ8WY54 764 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 SECISBP2LQ93073 1101 aaKnown RBP11.97□□□□□ -0.49
SND1-212ENST00000485871 MYLPFQ96A32 169 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 TMEM169Q96HH4 297 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 RNPC3Q96LT9 517 aaKnown RBP11.97□□□□□ -0.49
SND1-212ENST00000485871 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 TTPALQ9BTX7 342 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 THAP2Q9H0W7 228 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 TJP2Q9UDY2 1190 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 BACE2Q9Y5Z0 518 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 DUSP10Q9Y6W6 482 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 MYO16Q9Y6X6 1858 aa11.97□□□□□ -0.49
SND1-212ENST00000485871 MTCL1Q9Y4B5 1905 aaKnown RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 A0A0A6YYK5 440 aaPredicted RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 FAM170AA1A519 330 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 OR6C75A6NL08 312 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 C5orf67F2Z3F1 127 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 LILRB3O75022 631 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 BEST1O76090 585 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 FGF18O76093 207 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 VNN2O95498 520 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 MYOGP15173 224 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 ADORA2BP29275 332 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 BMPR1AP36894 532 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 NSFP46459 744 aaKnown RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 BCAT1P54687 386 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 HADHBP55084 474 aaKnown RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 DSG1Q02413 1049 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 PDCLQ13371 301 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 GRIN2CQ14957 1233 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 USP41Q3LFD5 358 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 SLC8B1Q6J4K2 584 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 ZNF280DQ6N043 979 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 PPP1R2P3Q6NXS1 205 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 PMF1Q6P1K2 205 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 PRSS55Q6UWB4 352 aaPredicted RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 MMS22LQ6ZRQ5 1243 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 CLEC20AQ6ZU45 233 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 ANKS3Q6ZW76 656 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 SPRED2Q7Z698 418 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 CEP57Q86XR8 500 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 GPR65Q8IYL9 337 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 CEP112Q8N8E3 955 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 STK32AQ8WU08 396 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 ATXN2LQ8WWM7 1075 aaKnown RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 VCPIP1Q96JH7 1222 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 CPXM1Q96SM3 734 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 NAPGQ99747 312 aaPredicted RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 DUSP16Q9BY84 665 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 OXCT2Q9BYC2 517 aaPredicted RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 IRX2Q9BZI1 471 aaPredicted RBP11.96□□□□□ -0.49
SND1-212ENST00000485871 DNAI2Q9GZS0 605 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 CSNK1G1Q9HCP0 422 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 LZTFL1Q9NQ48 299 aa11.96□□□□□ -0.49
SND1-212ENST00000485871 AVENQ9NQS1 362 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms