RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 SMG7Q92540 1137 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 HNRNPABQ99729 332 aaKnown RBP16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 STK33Q9BYT3 514 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 ADAM7Q9H2U9 754 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 KRT82Q9NSB4 513 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 HCFC1R1Q9NWW0 138 aa16.44■□□□□ 0.22
RPUSD3-217ENST00000485705 CYP26A1O43174 497 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 AP1G2O75843 785 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 BEST1O76090 585 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 PAEPP09466 180 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 RFX1P22670 979 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 GRIK1P39086 918 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 MAGEA11P43364 429 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 ALDH1A3P47895 512 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 NTHL1P78549 312 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 LEXMQ3ZCV2 418 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 SGO2Q562F6 1265 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 ARHGAP17Q68EM7 881 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 VSTM1Q6UX27 236 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 FAM71AQ8IYT1 594 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 ZMIZ2Q8NF64 920 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 SMOQ99835 787 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 PIDD1Q9HB75 910 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 USP15Q9Y4E8 981 aaPredicted RBP16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 DENND4CQ5VZ89 1909 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 UNC80Q8N2C7 3258 aa16.43■□□□□ 0.22
RPUSD3-217ENST00000485705 F8VP50 259 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 F8VZ95 297 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 MBTPS2O43462 519 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 VDRP11473 427 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 TRIM21P19474 475 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 CLCN1P35523 988 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 EPHB3P54753 998 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 JAM2P57087 298 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 ITIH3Q06033 890 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 SMAD4Q13485 552 aaKnown RBP16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 MTMR3Q13615 1198 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 GOLGA7BQ2TAP0 167 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 GRASPQ7Z6J2 395 aaPredicted RBP16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 HS6ST3Q8IZP7 471 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 SUSD6Q92537 303 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 SMARCD1Q96GM5 515 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 DNAI2Q9GZS0 605 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 THEGQ9P2T0 379 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 PATJQ8NI35 1801 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 ATP8B3O60423 1300 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 DENND4AQ7Z401 1863 aa16.42■□□□□ 0.22
RPUSD3-217ENST00000485705 O00370 1275 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 NRG2O14511 850 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 XYLBO75191 536 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 CFHP08603 1231 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 POU2F2P09086 479 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 FAM200BP0CF97 657 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 KCNQ1P51787 676 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 MAP3K7CLP57077 242 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 RPL10AP62906 217 aaKnown RBP16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 PLD1Q13393 1074 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 CES5AQ6NT32 575 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 SARM1Q6SZW1 724 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 CLEC20AQ6ZU45 233 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 DNAJB7Q7Z6W7 309 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 SLC47A2Q86VL8 602 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 TTC30AQ86WT1 665 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 UBA3Q8TBC4 463 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 ZNF512Q96ME7 567 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 CORO1BQ9BR76 489 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 TTYH3Q9C0H2 523 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 ZNF334Q9HCZ1 680 aaPredicted RBP16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 TSPAN16Q9UKR8 245 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 KIAA1257Q9ULG3 409 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 ANAPC1Q9H1A4 1944 aa16.41■□□□□ 0.22
RPUSD3-217ENST00000485705 OBSL1O75147 1896 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 SLC38A8A6NNN8 435 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 THAP12O43422 761 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 CBFA2T2O43439 604 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 GFPT2O94808 682 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 MICAL2O94851 1124 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 HMGA1P17096 107 aaKnown RBP16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 GNA15P30679 374 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 USP46P62068 366 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 CNGA2Q16280 664 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 ATAT1Q5SQI0 421 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 PTCRAQ6ISU1 281 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 TMC8Q8IU68 726 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 ELMOD1Q8N336 334 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 ZNF606Q8WXB4 792 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 BAP1Q92560 729 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 PSMG2Q969U7 264 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 C8orf48Q96LL4 319 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 LRRC3Q9BY71 257 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 DUSP16Q9BY84 665 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 POMKQ9H5K3 350 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 CSNK1G1Q9HCP0 422 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 DMAP1Q9NPF5 467 aaPredicted RBP16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 MYO10Q9HD67 2058 aa16.4■□□□□ 0.22
RPUSD3-217ENST00000485705 HHLA1C9JL84 531 aa16.39■□□□□ 0.21
RPUSD3-217ENST00000485705 TULP2O00295 520 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms