RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 GABBR1Q9UBS5 961 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 SEC63Q9UGP8 760 aaKnown RBP5.96□□□□□ -1.46
PTPN4-210ENST00000485247 BPTFQ12830 3046 aa5.96□□□□□ -1.46
PTPN4-210ENST00000485247 BCLAF3A2AJT9 711 aaKnown RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 PATE3B3GLJ2 98 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 MEIS1O00470 390 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 ZNF263O14978 683 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 DCLK1O15075 740 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 ADAM12O43184 909 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 RHOP08100 348 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 RDXP35241 583 aaKnown RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 MLH1P40692 756 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 SCNN1GP51170 649 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 KPNA1P52294 538 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CREMQ03060 361 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 DSC1Q08554 894 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 IMMTQ16891 758 aaKnown RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 DGKKQ5KSL6 1271 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 RTP2Q5QGT7 225 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CYB5R4Q7L1T6 521 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 MRPL10Q7Z7H8 261 aaKnown RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CEP57Q86XR8 500 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 TTC8Q8TAM2 541 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 MDM1Q8TC05 714 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CSGALNACT1Q8TDX6 532 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CRELD1Q96HD1 420 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 GAD1Q99259 594 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 DUSP15Q9H1R2 295 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CHMP4BQ9H444 224 aaKnown RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CNNM2Q9H8M5 875 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 TRPV5Q9NQA5 729 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 MBNL3Q9NUK0 354 aaKnown RBP5.95□□□□□ -1.46
PTPN4-210ENST00000485247 MIOSQ9NXC5 875 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CACNG4Q9UBN1 327 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 ADAM28Q9UKQ2 775 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 TLR6Q9Y2C9 796 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 RAI2Q9Y5P3 530 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 SPAG17Q6Q759 2223 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 CNTNAP2Q9UHC6 1331 aa5.95□□□□□ -1.46
PTPN4-210ENST00000485247 NOTCH4Q99466 2003 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ASXL3Q9C0F0 2248 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 CCDC163A0A0D9SF12 145 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 hCG_1642624A0A1W2PR95 340 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 FAM221BA6H8Z2 402 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ARL5CA6NH57 179 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 IPO5O00410 1097 aaKnown RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 IFIT3O14879 490 aaKnown RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 TADA2AO75478 443 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 AKAP3O75969 853 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 RHOBTB1O94844 696 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 RNASE1P07998 156 aaKnown RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ITGA4P13612 1032 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 GBP1P32455 592 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ZNF76P36508 570 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 VIPR2P41587 438 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ST13P50502 369 aaKnown RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 MFAP1P55081 439 aaKnown RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ETF1P62495 437 aaKnown RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 IRX4P78413 519 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 PON2Q15165 354 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ELF2Q15723 593 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 PSMD5Q16401 504 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 UBXN11Q5T124 520 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 TMCO4Q5TGY1 634 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 PKN3Q6P5Z2 889 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 RHPN2Q8IUC4 686 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 KSR1Q8IVT5 923 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 GPR65Q8IYL9 337 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 RIN3Q8TB24 985 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 LNX1Q8TBB1 728 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 HASPINQ8TF76 798 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 TCEAL4Q96EI5 215 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 FAM167AQ96KS9 214 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 NLRP4Q96MN2 994 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 ZSWIM3Q96MP5 696 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 MIPEPQ99797 713 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 SH2D3AQ9BRG2 576 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 APOL6Q9BWW8 343 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 SPZ1Q9BXG8 430 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 INO80BQ9C086 356 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 GOLGA2P5Q9HBQ8 144 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 NRBP2Q9NSY0 501 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 AGPAT5Q9NUQ2 364 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 POLR3BQ9NW08 1133 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-210ENST00000485247 TCEAL9Q9UHQ7 104 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 MAPK8IP1Q9UQF2 711 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 HES2Q9Y543 173 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 PCDHA10Q9Y5I2 948 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 COL4A2P08572 1712 aa5.94□□□□□ -1.46
PTPN4-210ENST00000485247 LAMA5O15230 3695 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 FAM86B1E9PN63 330 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 SPECC1L-ADORA2AF8WAN1 911 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 H0Y626 953 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 J3QKU1 62 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 ARNTLO00327 626 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 MEFVO15553 781 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-210ENST00000485247 ARHGAP6O43182 974 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 TRIM16O95361 564 aa5.93□□□□□ -1.46
PTPN4-210ENST00000485247 POU2F2P09086 479 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms