RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 SDHAF4Q5VUM1 108 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 RNF43Q68DV7 783 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 NAIF1Q69YI7 327 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-227ENST00000485102 VSTM1Q6UX27 236 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 DYMQ7RTS9 669 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 RASSF3Q86WH2 238 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 CSGALNACT2Q8N6G5 542 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 EPSTI1Q96J88 318 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 HHIPQ96QV1 700 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 FAM213AQ9BRX8 229 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 MRPL44Q9H9J2 332 aaKnown RBP13.96□□□□□ -0.17
HDAC6-227ENST00000485102 POLR3BQ9NW08 1133 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-227ENST00000485102 CCDC39Q9UFE4 941 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 SIX4Q9UIU6 781 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-227ENST00000485102 MORC2Q9Y6X9 1032 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-227ENST00000485102 KIAA1549LQ6ZVL6 1849 aa13.96□□□□□ -0.17
HDAC6-227ENST00000485102 PI4KAP42356 2102 aa13.96□□□□□ -0.18
HDAC6-227ENST00000485102 MYO18AQ92614 2054 aaKnown RBP13.95□□□□□ -0.18
HDAC6-227ENST00000485102 ASCC3Q8N3C0 2202 aaKnown RBP13.95□□□□□ -0.18
HDAC6-227ENST00000485102 MYMKA6NI61 221 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 KIAA0391O15091 583 aaKnown RBP13.95□□□□□ -0.18
HDAC6-227ENST00000485102 CAVIN2O95810 425 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 CKMP06732 381 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 HDCP19113 662 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 SOWAHAQ2M3V2 549 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 C4orf50Q6ZRC1 276 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 USP49Q70CQ1 688 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 SV2BQ7L1I2 683 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 OSTM1Q86WC4 334 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 SPATA2LQ8IUW3 424 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-227ENST00000485102 ADGRF2Q8IZF7 708 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 ARL14EPQ8N8R7 260 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-227ENST00000485102 ZSWIM2Q8NEG5 633 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 SH3RF2Q8TEC5 729 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 USP33Q8TEY7 942 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 RBAKQ9NYW8 714 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-227ENST00000485102 SRPRBQ9Y5M8 271 aaKnown RBP13.95□□□□□ -0.18
HDAC6-227ENST00000485102 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 WNT6Q9Y6F9 365 aa13.95□□□□□ -0.18
HDAC6-227ENST00000485102 THADAQ6YHU6 1953 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 CD2BP2O95400 341 aaKnown RBP13.94□□□□□ -0.18
HDAC6-227ENST00000485102 NFATC1O95644 943 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 ACAT1P24752 427 aaKnown RBP13.94□□□□□ -0.18
HDAC6-227ENST00000485102 PPP3CCP48454 512 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
HDAC6-227ENST00000485102 USP39Q53GS9 565 aaKnown RBP13.94□□□□□ -0.18
HDAC6-227ENST00000485102 RRAGBQ5VZM2 374 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 PMS2CLQ68D20 193 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 STKLD1Q8NE28 680 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 SAAL1Q96ER3 474 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 TTLL2Q9BWV7 592 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 LINC00597Q9H2U6 94 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 SMOC1Q9H4F8 434 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 PDE11AQ9HCR9 933 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 EHD2Q9NZN4 543 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 CDH9Q9ULB4 789 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 PTPRDP23468 1912 aa13.94□□□□□ -0.18
HDAC6-227ENST00000485102 A0A0A0MRY4 1105 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 LNP1A1A4G5 178 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 C2orf78A6NCI8 922 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 K7EQS6 105 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 DCLK1O15075 740 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 GCNT3O95395 438 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 OLFM2O95897 454 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 PROS1P07225 676 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 PDIA4P13667 645 aaKnown RBP13.93□□□□□ -0.18
HDAC6-227ENST00000485102 OPRD1P41143 372 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 DGKEP52429 567 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 SLC7A9P82251 487 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 MRPS21P82921 87 aaKnown RBP13.93□□□□□ -0.18
HDAC6-227ENST00000485102 ZXDBP98169 803 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 CREB5Q02930 508 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 MYO1EQ12965 1108 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 KCNB1Q14721 858 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 SURF1Q15526 300 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 GAB4Q2WGN9 574 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 HSF5Q4G112 596 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-227ENST00000485102 DAB2IPQ5VWQ8 1189 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 SCARA3Q6AZY7 606 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 DENND5BQ6ZUT9 1274 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 ADGRG2Q8IZP9 1017 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 TSTD1Q8NFU3 115 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 KBTBD7Q8WVZ9 684 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 CNOT6LQ96LI5 555 aaKnown RBP13.93□□□□□ -0.18
HDAC6-227ENST00000485102 CBWD1Q9BRT8 395 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 EDEM2Q9BV94 578 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 TRPC7Q9HCX4 862 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 INTS13Q9NVM9 706 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 MAGEC2Q9UBF1 373 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-227ENST00000485102 FBXO2Q9UK22 296 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-227ENST00000485102 MMP17Q9ULZ9 603 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 WASF3Q9UPY6 502 aa13.93□□□□□ -0.18
HDAC6-227ENST00000485102 HELZP42694 1942 aaKnown RBP13.93□□□□□ -0.18
HDAC6-227ENST00000485102 TMEM191BP0C7N4 346 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 CEACAM1P13688 526 aa13.92□□□□□ -0.18
HDAC6-227ENST00000485102 CSRP1P21291 193 aaKnown RBP13.92□□□□□ -0.18
HDAC6-227ENST00000485102 WARSP23381 471 aaKnown RBP13.92□□□□□ -0.18
HDAC6-227ENST00000485102 EIF2DP41214 584 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms