RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 BCAT1P54687 386 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 PDE4CQ08493 712 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 BST2Q10589 180 aaKnown RBP17.6■□□□□ 0.41
CTSA-207ENST00000484855 HLTFQ14527 1009 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTSA-207ENST00000484855 TTC27Q6P3X3 843 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 SH3TC2Q8TF17 1288 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 SLC35F5Q8WV83 523 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 CAVIN3Q969G5 261 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 SENP8Q96LD8 212 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 VIPAS39Q9H9C1 493 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 UBN1Q9NPG3 1134 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 PHF24Q9UPV7 400 aa17.6■□□□□ 0.41
CTSA-207ENST00000484855 ARVCFO00192 962 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 COILP38432 576 aaPredicted RBP17.59■□□□□ 0.41
CTSA-207ENST00000484855 SNX16P57768 344 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 CBX1P83916 185 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 NNTQ13423 1086 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 KCTD19Q17RG1 926 aaPredicted RBP17.59■□□□□ 0.41
CTSA-207ENST00000484855 ATP13A4Q4VNC1 1196 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 ODF2Q5BJF6 829 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 WSCD1Q658N2 575 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 TRAF7Q6Q0C0 670 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 JAMLQ86YT9 394 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 RCOR2Q8IZ40 523 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 EIF1ADQ8N9N8 165 aaKnown RBP17.59■□□□□ 0.41
CTSA-207ENST00000484855 ANKRD52Q8NB46 1076 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 B3GALNT2Q8NCR0 500 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 RNF25Q96BH1 459 aaPredicted RBP17.59■□□□□ 0.41
CTSA-207ENST00000484855 HERPUD2Q9BSE4 406 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 SLC4A5Q9BY07 1137 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 OSBPL8Q9BZF1 889 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 ACBD3Q9H3P7 528 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 DDX56Q9NY93 547 aaKnown RBP17.59■□□□□ 0.41
CTSA-207ENST00000484855 LRCH4O75427 683 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 FAM163BP0C2L3 166 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 IGFBP6P24592 240 aaPredicted RBP17.59■□□□□ 0.41
CTSA-207ENST00000484855 RPL9P32969 192 aaKnown RBP17.59■□□□□ 0.41
CTSA-207ENST00000484855 FNTAP49354 379 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 DDX42Q86XP3 938 aaKnown RBP eCLIP17.59■□□□□ 0.41
CTSA-207ENST00000484855 SLC2A14Q8TDB8 520 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 STK32AQ8WU08 396 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■■■■ 50.8
CTSA-207ENST00000484855 SEC14L1Q92503 715 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 SLITRK1Q96PX8 696 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 HEMGNQ9BXL5 484 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 LRRC19Q9H756 370 aa17.59■□□□□ 0.41
CTSA-207ENST00000484855 PI4K2BG5E9Z4 385 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 DAPK3O43293 454 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 POMCP01189 267 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 GPD1P21695 349 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 PTGIRP43119 386 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 GRIK3Q13003 919 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 GPS2Q13227 327 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 HADHQ16836 314 aaKnown RBP17.58■□□□□ 0.4
CTSA-207ENST00000484855 TXNRD3NBQ6F5E7 133 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 DSTYKQ6XUX3 929 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 POLNQ7Z5Q5 900 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 TMEM110Q86TL2 294 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 ECHDC2Q86YB7 292 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 CCDC105Q8IYK2 499 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 C3orf58Q8NDZ4 430 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 C1orf54Q8WWF1 131 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 PIWIL1Q96J94 861 aaKnown RBP17.58■□□□□ 0.4
CTSA-207ENST00000484855 DPH5Q9H2P9 285 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 FAM114A2Q9NRY5 505 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 HPCAL4Q9UM19 191 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 INPP5FQ9Y2H2 1132 aa17.58■□□□□ 0.4
CTSA-207ENST00000484855 ACAT1P24752 427 aaKnown RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 SLC25A11Q02978 314 aaKnown RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 KLF1Q13351 362 aaPredicted RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 UPP1Q16831 310 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 OLFML1Q6UWY5 402 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 TMEM86AQ8N2M4 240 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ERP44Q9BS26 406 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 TRIM31Q9BZY9 425 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ASNSD1Q9NWL6 643 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 GABRDO14764 452 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 RNF8O76064 485 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 KRT7P08729 469 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 FAM153BP0C7A2 387 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 TKTP29401 623 aaKnown RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 ECHS1P30084 290 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ZNF143P52747 638 aaPredicted RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 MBTPS1Q14703 1052 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ACAP1Q15027 740 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 FAM153CQ494X1 144 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 MFSD7Q6UXD7 560 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ANKS1BQ7Z6G8 1248 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ZNF598Q86UK7 904 aaKnown RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 ZDHHC17Q8IUH5 632 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ARFGAP1Q8N6T3 406 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ACSF2Q96CM8 615 aaPredicted RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 PAAF1Q9BRP4 392 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 ZWILCHQ9H900 591 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 DDX43Q9NXZ2 648 aaKnown RBP17.57■□□□□ 0.4
CTSA-207ENST00000484855 FAM153AQ9UHL3 310 aa17.57■□□□□ 0.4
CTSA-207ENST00000484855 C2CD4BA6NLJ0 364 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 ATP2C2O75185 946 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 GRAP2O75791 330 aa17.56■□□□□ 0.4
CTSA-207ENST00000484855 PTPN1P18031 435 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms