RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 SLC35F5Q8WV83 523 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 RNPC3Q96LT9 517 aaKnown RBP21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 ALS2CR12Q96Q35 445 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 UVRAGQ9P2Y5 699 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 CAPN6Q9Y6Q1 641 aa21.62■■□□□ 1.05
VCPKMT-203ENST00000484763 LINC00271P0C7V0 271 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 ZNF569Q5MCW4 686 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 C4orf50Q6ZRC1 276 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 LRRTM3Q86VH5 581 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 TRIM58Q8NG06 486 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 SMARCD1Q96GM5 515 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 CALR3Q96L12 384 aaKnown RBP21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 HERC2P3Q9BVR0 1158 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 MIS12Q9H081 205 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 OSGEPQ9NPF4 335 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 ST7Q9NRC1 585 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 CHST7Q9NS84 486 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 TMLHEQ9NVH6 421 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 SCINQ9Y6U3 715 aa21.61■■□□□ 1.05
VCPKMT-203ENST00000484763 XPO1O14980 1071 aaKnown RBP21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 PLA2G4AP47712 749 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 GABRB2P47870 512 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 SNX16P57768 344 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 SLC39A12Q504Y0 691 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 KIAA1841Q6NSI8 718 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 PMF1Q6P1K2 205 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 CLEC20AQ6ZU45 233 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 DDX53Q86TM3 631 aaKnown RBP21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 C18orf8Q96DM3 657 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 NUP85Q9BW27 656 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 STK39Q9UEW8 545 aa21.6■■□□□ 1.05
VCPKMT-203ENST00000484763 TULP2O00295 520 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 AP1G2O75843 785 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 OR4Q2P0C623 313 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 HADHBP55084 474 aaKnown RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 GSCP56915 257 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 NFE2Q16621 373 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 CYP4A22Q5TCH4 519 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 SPATA2LQ8IUW3 424 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 ZNF564Q8TBZ8 553 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 RIN2Q8WYP3 895 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 PIK3R5Q8WYR1 880 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 SLC4A5Q9BY07 1137 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 CYLDQ9NQC7 956 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 RRAGDQ9NQL2 400 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 WDR35Q9P2L0 1181 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 CHORDC1Q9UHD1 332 aaPredicted RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 COG5Q9UP83 839 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 PCDHGC5Q9Y5F6 944 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 LCHNA4D1U4 455 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 TBC1D4O60343 1298 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 MTA2O94776 668 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 ERBB2P04626 1255 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 GLUD2P49448 558 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 RGS7P49802 495 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 PSMD5Q16401 504 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 PLEKHA7Q6IQ23 1121 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 SYT10Q6XYQ8 523 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 SLC35F6Q8N357 371 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 C3orf20Q8ND61 904 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 MRPL47Q9HD33 250 aaKnown RBP21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 PARVAQ9NVD7 372 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 MTRRQ9UBK8 725 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 TJP2Q9UDY2 1190 aa21.59■■□□□ 1.05
VCPKMT-203ENST00000484763 E5RJQ4 531 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 FGF18O76093 207 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 CDR1P51861 262 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 DSG1Q02413 1049 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 KRT17Q04695 432 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 SHHQ15465 462 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 DNTTIP2Q5QJE6 756 aaKnown RBP21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 LLGL2Q6P1M3 1020 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 DNAJC24Q6P3W2 148 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 PRSS55Q6UWB4 352 aaPredicted RBP21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 PHLDB2Q86SQ0 1253 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 XYLT1Q86Y38 959 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 TPCN2Q8NHX9 752 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 HSFY1Q96LI6 401 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 WDR24Q96S15 920 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 DNAI1Q9UI46 699 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 RWDD3Q9Y3V2 267 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 BACE2Q9Y5Z0 518 aa21.58■■□□□ 1.05
VCPKMT-203ENST00000484763 GBF1Q92538 1859 aa21.58■■□□□ 1.04
VCPKMT-203ENST00000484763 CEP290O15078 2479 aa21.58■■□□□ 1.04
VCPKMT-203ENST00000484763 CPB1P15086 417 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 ACADSBP45954 432 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 RPL34P49207 117 aaKnown RBP21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 MAP3K7CLP57077 242 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 MAMLD1Q13495 774 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 TMEM110Q86TL2 294 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 PIGZQ86VD9 579 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 FUBP3Q96I24 572 aaKnown RBP eCLIP21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 RHOBTB2Q9BYZ6 727 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 BEST1O76090 585 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 URODP06132 367 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 BDNFP23560 247 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 RABGGTBP53611 331 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 ZNF268Q14587 947 aaPredicted RBP21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 CFAP221Q4G0U5 840 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 SMOQ99835 787 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms