RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 SLFN14P0C7P3 912 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 PFKLP17858 780 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 SDHBP21912 280 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 ATICP31939 592 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 CNR2P34972 360 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 IFNAR2P48551 515 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 PSMC1P62191 440 aaKnown RBP12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 TNK2Q07912 1038 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 EHHADHQ08426 723 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 PSMD2Q13200 908 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 CUL4BQ13620 913 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 KCNB1Q14721 858 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 WDR72Q3MJ13 1102 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 TMEM150AQ86TG1 271 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 CPA6Q8N4T0 437 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 MYCBPAPQ8TBZ2 947 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 USP13Q92995 863 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 MYLPFQ96A32 169 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 FAM84AQ96KN4 292 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 SPATA17Q96L03 361 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 PKMYT1Q99640 499 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 FAM83CQ9BQN1 747 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 TRPM5Q9NZQ8 1165 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 SPTBN4Q9H254 2564 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 ATP8B3O60423 1300 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 ATP2C2O75185 946 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 PAPSS2O95340 614 aaPredicted RBP12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 STAU1O95793 577 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 CST3P01034 146 aaPredicted RBP12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 HDCP19113 662 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 TRIM21P19474 475 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 BDNFP23560 247 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 LMO2P25791 158 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 CASP1P29466 404 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 PPP3CCP48454 512 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 KRT85P78386 507 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 SATB1Q01826 763 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 NR1H3Q13133 447 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 BIRC3Q13489 604 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 TXNDC11Q6PKC3 985 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 DCLK2Q8N568 766 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 CCDC34Q96HJ3 373 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 EBF3Q9H4W6 596 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 RBM12Q9NTZ6 932 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 DUS2Q9NX74 493 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 NXF1Q9UBU9 619 aaKnown RBP12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 SERTAD1Q9UHV2 236 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 CCL26Q9Y258 94 aa12.75□□□□□ -0.37
SNRNP200-206ENST00000484372 A8MXQ7 604 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 P4HA1P13674 534 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 DRD1P21728 446 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 CMA1P23946 247 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 CCINQ13939 588 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 PUM1Q14671 1186 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 MTF1Q14872 753 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 MDH1BQ5I0G3 518 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 PRR23BQ6ZRT6 265 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 LONP2Q86WA8 852 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 CCDC26Q8TAB7 109 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 OSCP1Q8WVF1 389 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 PAGE5Q96GU1 130 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 PCED1BQ96HM7 432 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 MRPL45Q9BRJ2 306 aaKnown RBP12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 ELOVL4Q9GZR5 314 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 COL4A2P08572 1712 aa12.74□□□□□ -0.37
SNRNP200-206ENST00000484372 ZNF638Q14966 1978 aaKnown RBP12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 PRR5-ARHGAP8B1AHC4 643 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 TRDMT1O14717 391 aaKnown RBP12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 HCRTO43612 131 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 CALUO43852 315 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 TDGF1P13385 188 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 PTPN1P18031 435 aaKnown RBP12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 MYL6P60660 151 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 ARHGAP8P85298 464 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 LMNB2Q03252 620 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 SIM2Q14190 667 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 GAS6Q14393 721 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 FBXO43Q4G163 708 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 TMEM196Q5HYL7 178 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 SCARA3Q6AZY7 606 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 TRIM68Q6AZZ1 485 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 LAIR1Q6GTX8 287 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 Q6ZS52 159 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 GRAMD1CQ8IYS0 662 aa12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 ARL14EPQ8N8R7 260 aaPredicted RBP12.73□□□□□ -0.37
SNRNP200-206ENST00000484372 TNIP3Q96KP6 325 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms