RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SORBS3O60504 671 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 GALCP54803 685 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 VBP1P61758 197 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 EIF2B5Q13144 721 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 ASB12Q8WXK4 309 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 AGPAT1Q99943 283 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 SEPT9Q9UHD8 586 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 SLC12A6Q9UHW9 1150 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 MYH13Q9UKX3 1938 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 SESN2P58004 480 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 MTM1Q13496 603 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 CDKL3Q8IVW4 592 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 CCDC36Q8IYA8 594 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 ANKS1AQ92625 1134 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 IRF2BPLQ9H1B7 796 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 LRMDAQ9H2I8 198 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 FCHO1O14526 889 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 MAGEA2P43356 314 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 CPXCR1Q8N123 301 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 AMER2Q8N7J2 671 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 ZC3H10Q96K80 434 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 NACC1Q96RE7 527 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 THUMPD3Q9BV44 507 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 STK33Q9BYT3 514 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 RARGP13631 454 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 CHRNDQ07001 517 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 POLA2Q14181 598 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 EID3Q8N140 333 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 LSM14AQ8ND56 463 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 BHLHE22Q8NFJ8 381 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 GOLPH3Q9H4A6 298 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 DUSP10Q9Y6W6 482 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 BIRC5O15392 142 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 PRLRP16471 622 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 GSCP56915 257 aaPredicted RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 LSM3P62310 102 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 ARF5P84085 180 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 GTF2H3Q13889 308 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 TYW3Q6IPR3 259 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 DHDDSQ86SQ9 333 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 CACTIN-AS1Q8N1I8 211 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 WDR35Q9P2L0 1181 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 TRMT6Q9UJA5 497 aaKnown RBP10.62□□□□□ -0.71
COL12A1-207ENST00000483888 TEX14Q8IWB6 1497 aa10.62□□□□□ -0.71
COL12A1-207ENST00000483888 A0A1W2PQJ5 194 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 K7ERI5 159 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ATP9BO43861 1147 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 RFX1P22670 979 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 SSTR3P32745 418 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ITGA1P56199 1179 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 BCAR1P56945 870 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ITPRIPL1Q6GPH6 555 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 PRR23BQ6ZRT6 265 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 EXOC3L1Q86VI1 746 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 CENPTQ96BT3 561 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ELMO2Q96JJ3 720 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 CDC42EP4Q9H3Q1 356 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 PREBQ9HCU5 417 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 DNAJC16Q9Y2G8 782 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 PCDHGA10Q9Y5H3 936 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 FAM153BP0C7A2 387 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 HIBADHP31937 336 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 GCLMP48507 274 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 FAM153CQ494X1 144 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ABRAXAS1Q6UWZ7 409 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 RIPOR1Q6ZS17 1223 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 FAM118BQ9BPY3 351 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 PIF1Q9H611 641 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 CLK4Q9HAZ1 481 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 DMGDHQ9UI17 866 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 TLR2O60603 784 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 SLC16A1P53985 500 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 TOP3AQ13472 1001 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 TMEM270Q6UE05 265 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ATG16L2Q8NAA4 619 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 TATDN2Q93075 761 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 GPATCH1Q9BRR8 931 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 UBXN6Q9BZV1 441 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 DYRK4Q9NR20 520 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 A8MUI8 341 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 SYNCRIPO60506 623 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 CSNK2BP67870 215 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 DENND5AQ6IQ26 1287 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 IFT43Q96FT9 208 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 NADKO95544 446 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ASMTLO95671 621 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ERVK-24P63145 666 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 IZUMO1Q8IYV9 350 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 TDRD5Q8NAT2 981 aaKnown RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 TPCN2Q8NHX9 752 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 NYXQ9GZU5 481 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 GPBP1L1Q9HC44 474 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 KIAA1586Q9HCI6 787 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 CRNNQ9UBG3 495 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 FLT4P35916 1363 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 UBA6A0AVT1 1052 aaPredicted RBP10.61□□□□□ -0.71
COL12A1-207ENST00000483888 NEURL1BA8MQ27 555 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 NR5A2O00482 541 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 GNA15P30679 374 aa10.61□□□□□ -0.71
COL12A1-207ENST00000483888 ACTR2P61160 394 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms