RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PILRBQ9UKJ0 227 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 PCDH15Q96QU1 1955 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 PLXND1Q9Y4D7 1925 aa11.72□□□□□ -0.53
SMARCC1-205ENST00000483847 TRAV19A0A0A6YYK7 116 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 C2orf78A6NCI8 922 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 UPK3BL1B0FP48 263 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 TISP43B9A030 160 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 UPK3BL2E5RIL1 263 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 SGK1O00141 431 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 PIGRP01833 764 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 CYP2F1P24903 491 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 ACOT2P49753 483 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 TAF6P49848 677 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 SLC12A3P55017 1021 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 ZXDBP98169 803 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 SCAPQ12770 1279 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 NR1H3Q13133 447 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 KYAT1Q16773 422 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 MAP7D1Q3KQU3 841 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 ARSHQ5FYA8 562 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 EMC10Q5UCC4 262 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 PEAR1Q5VY43 1037 aaPredicted RBP11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 CD302Q8IX05 232 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 DCP1BQ8IZD4 617 aaKnown RBP11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 DEFB119Q8N690 84 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 SYT2Q8N9I0 419 aaPredicted RBP11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 TXNDC5Q8NBS9 432 aaKnown RBP11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 TRMT2BQ96GJ1 504 aaKnown RBP11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 C8orf76Q96K31 380 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 MYRFLQ96LU7 910 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 BBC3Q96PG8 261 aaPredicted RBP11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 RAB34Q9BZG1 259 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 CCSER1Q9C0I3 900 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 DPP3Q9NY33 737 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
SMARCC1-205ENST00000483847 CEP192Q8TEP8 1941 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 ANKRD63C9JTQ0 380 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 H0Y626 953 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 SCAMP3O14828 347 aaKnown RBP11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 ALDH1A2O94788 518 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 TRIM16O95361 564 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 SEC24BO95487 1268 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 KLF8O95600 359 aaPredicted RBP11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 CD59P13987 128 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 ACAT1P24752 427 aaKnown RBP11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 SLC6A11P48066 632 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 TRAPPC10P48553 1259 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 LYSMD4Q5XG99 296 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 SCARA3Q6AZY7 606 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 IL17RCQ8NAC3 791 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 CCDC26Q8TAB7 109 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 WHAMMQ8TF30 809 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 HMGB4Q8WW32 186 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 CAMK1GQ96NX5 476 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 PKMYT1Q99640 499 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 KCNG1Q9UIX4 513 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 SLC6A14Q9UN76 642 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 DERAQ9Y315 318 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 APC2O95996 2303 aa11.7□□□□□ -0.54
SMARCC1-205ENST00000483847 PLXNB3Q9ULL4 1909 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 KPNA7A9QM74 516 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 HCRTO43612 131 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 ADAM23O75077 832 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 NFATC1O95644 943 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 CYP17A1P05093 508 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 PLA2G4BP0C869 781 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 HDCP19113 662 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 TIE1P35590 1138 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 ATXN3P54252 364 aaPredicted RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 ANAPC15P60006 121 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 RPL10AP62906 217 aaKnown RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 MRPS21P82921 87 aaKnown RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 TSPY1Q01534 308 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 GNL2Q13823 731 aaKnown RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 HYIQ5T013 277 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 PDCL2Q8N4E4 241 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 HDDC3Q8N4P3 179 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 MINDY1Q8N5J2 469 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 PNPLA1Q8N8W4 532 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 FBXO18Q8NFZ0 1043 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 KCNN1Q92952 543 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 IKZF4Q9H2S9 585 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 CAPN10Q9HC96 672 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 BCCIPQ9P287 314 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 LARSQ9P2J5 1176 aaKnown RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 UXTQ9UBK9 157 aaPredicted RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 GTF3C4Q9UKN8 822 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 ARHGAP26Q9UNA1 814 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 C2CD2Q9Y426 696 aa11.69□□□□□ -0.54
SMARCC1-205ENST00000483847 H0YCG3 227 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 K7ENM7 598 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 OPHN1O60890 802 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 SERPINF2P08697 491 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 TCF3P15923 654 aa11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 KIR2DL1P43626 348 aaPredicted RBP11.68□□□□□ -0.54
SMARCC1-205ENST00000483847 GFPT1Q06210 699 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms