RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 TRIAP1O43715 76 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 DNAJB5O75953 348 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 PIM1P11309 404 aaPredicted RBP5.24□□□□□ -1.57
COMMD3-213ENST00000483684 KCNJ5P48544 419 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 NDUFV1P49821 464 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 BOP1Q14137 746 aaKnown RBP5.24□□□□□ -1.57
COMMD3-213ENST00000483684 FGL2Q14314 439 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 FAM102BQ5T8I3 360 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 PRAMEF17Q5VTA0 474 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 RUSC1-AS1Q66K80 236 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 CXorf57Q6NSI4 855 aaKnown RBP5.24□□□□□ -1.57
COMMD3-213ENST00000483684 DAAM2Q86T65 1068 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 KRT73Q86Y46 540 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 FAM109AQ8N4B1 249 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 SPATA3Q8NHX4 192 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 NT5C1BQ96P26 610 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 TPSD1Q9BZJ3 242 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
COMMD3-213ENST00000483684 PRRT4C9JH25 899 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 INSIG1O15503 277 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 UNC5CO95185 931 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 FAM163BP0C2L3 166 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 ITGALP20701 1170 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 RAPGEF1Q13905 1077 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 FAM160B1Q5W0V3 765 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 SLC2A7Q6PXP3 512 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 OVCH2Q7RTZ1 564 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 COL23A1Q86Y22 540 aaPredicted RBP5.23□□□□□ -1.57
COMMD3-213ENST00000483684 RUNDC1Q96C34 613 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 MRGPRX1Q96LB2 322 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 TMEM79Q9BSE2 394 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 ACTRT3Q9BYD9 372 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 TTYH3Q9C0H2 523 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 PRSS22Q9GZN4 317 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 ARHGEF3Q9NR81 526 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 CNNM1Q9NRU3 951 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 MTMR4Q9NYA4 1195 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 SH3BP4Q9P0V3 963 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 TCEAL9Q9UHQ7 104 aa5.23□□□□□ -1.57
COMMD3-213ENST00000483684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.23□□□□□ -1.57
COMMD3-213ENST00000483684 CTNND1O60716 968 aaKnown RBP5.22□□□□□ -1.57
COMMD3-213ENST00000483684 SOAT2O75908 522 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 GCLCP48506 637 aaPredicted RBP5.22□□□□□ -1.57
COMMD3-213ENST00000483684 RBM20Q5T481 1227 aaKnown RBP5.22□□□□□ -1.57
COMMD3-213ENST00000483684 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 ANKRD16Q6P6B7 361 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 SAMD14Q8IZD0 417 aaPredicted RBP5.22□□□□□ -1.57
COMMD3-213ENST00000483684 SLC46A1Q96NT5 459 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 P2RX7Q99572 595 aaKnown RBP5.22□□□□□ -1.57
COMMD3-213ENST00000483684 B3GNT5Q9BYG0 378 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 VPS16Q9H269 839 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 TUBA8Q9NY65 449 aaPredicted RBP5.22□□□□□ -1.57
COMMD3-213ENST00000483684 HESX1Q9UBX0 185 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 LRP12Q9Y561 859 aa5.22□□□□□ -1.57
COMMD3-213ENST00000483684 DCLK1O15075 740 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 TSPAN6O43657 245 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 TUSC2O75896 110 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 GRPP07492 148 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 U2AF1L5P0DN76 240 aaPredicted RBP5.21□□□□□ -1.58
COMMD3-213ENST00000483684 NDUFB7P17568 137 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 TKTP29401 623 aaKnown RBP5.21□□□□□ -1.58
COMMD3-213ENST00000483684 CD6P30203 668 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 ZNF134P52741 427 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 POLGP54098 1239 aaPredicted RBP5.21□□□□□ -1.58
COMMD3-213ENST00000483684 U2AF1Q01081 240 aaKnown RBP eCLIP5.21□□□□□ -1.58
COMMD3-213ENST00000483684 TBCCQ15814 346 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 MINDY4Q4G0A6 757 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 AARS2Q5JTZ9 985 aaKnown RBP5.21□□□□□ -1.58
COMMD3-213ENST00000483684 VPS53Q5VIR6 699 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 NXNQ6DKJ4 435 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 TMEM108Q6UXF1 575 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 NPNTQ6UXI9 565 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 CATSPERGQ6ZRH7 1159 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 TCEAL8Q8IYN2 117 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 MAGEB6Q8N7X4 407 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 HMCESQ96FZ2 354 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 ZMAT3Q9HA38 289 aaKnown RBP5.21□□□□□ -1.58
COMMD3-213ENST00000483684 PIH1D1Q9NWS0 290 aaKnown RBP5.21□□□□□ -1.58
COMMD3-213ENST00000483684 PLEKHM1Q9Y4G2 1056 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 CNTNAP2Q9UHC6 1331 aa5.21□□□□□ -1.58
COMMD3-213ENST00000483684 CACNA1IQ9P0X4 2223 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 CYP2D7A0A087X1C5 515 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 SMIM35A0A1B0GVV1 85 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 A0A1W2PPL8 197 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 H0YIZ8 118 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 NXPH3O95157 252 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 KITP10721 976 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 NPR1P16066 1061 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 MMP13P45452 471 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 AGFG1P52594 562 aaKnown RBP5.2□□□□□ -1.58
COMMD3-213ENST00000483684 DAZAP2Q15038 168 aaPredicted RBP5.2□□□□□ -1.58
COMMD3-213ENST00000483684 MLC1Q15049 377 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 LONRF3Q496Y0 759 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 ANO6Q4KMQ2 910 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 ARHGAP29Q52LW3 1261 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 SLC29A4Q7RTT9 530 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 ZDHHC17Q8IUH5 632 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 GALNT16Q8N428 558 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 ATRIPQ8WXE1 791 aa5.2□□□□□ -1.58
COMMD3-213ENST00000483684 TSR2Q969E8 191 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms