RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 CDC25CP30307 473 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 GNL1P36915 607 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-239ENST00000483086 MAGEA11P43364 429 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 NCOA4Q13772 614 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 VEPH1Q14D04 833 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 NFIL3Q16649 462 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 CEP135Q66GS9 1140 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 NAIF1Q69YI7 327 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-239ENST00000483086 TRIM68Q6AZZ1 485 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 SPATA2LQ8IUW3 424 aaPredicted RBP12.9□□□□□ -0.34
HDLBP-239ENST00000483086 C1orf210Q8IVY1 113 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 CMTM8Q8IZV2 173 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 OR6B3Q8NGW1 331 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 GOLGA5Q8TBA6 731 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 IRF7Q92985 503 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 TRMT2BQ96GJ1 504 aaKnown RBP12.9□□□□□ -0.34
HDLBP-239ENST00000483086 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.34
HDLBP-239ENST00000483086 HPS4Q9NQG7 708 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 C2orf42Q9NWW7 574 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 GCNT4Q9P109 453 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 NDRG2Q9UN36 371 aaKnown RBP12.9□□□□□ -0.34
HDLBP-239ENST00000483086 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 PIAS3Q9Y6X2 628 aa12.9□□□□□ -0.34
HDLBP-239ENST00000483086 LAMA1P25391 3075 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 PRR23AA6NEV1 266 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 F8VP50 259 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 CHADO15335 359 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 SP9P0CG40 484 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 CSH1P0DML2 217 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 CSH2P0DML3 217 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 PTPN1P18031 435 aaKnown RBP12.89□□□□□ -0.35
HDLBP-239ENST00000483086 NR2F2P24468 414 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 CCNE1P24864 410 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 ASPAP45381 313 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 MCCD1P59942 119 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-239ENST00000483086 CYP27A1Q02318 531 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 BIRC3Q13489 604 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 ZNF699Q32M78 642 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 TSSK4Q6SA08 328 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 GUF1Q8N442 669 aaKnown RBP12.89□□□□□ -0.35
HDLBP-239ENST00000483086 SPATA20Q8TB22 786 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 TMC2Q8TDI7 906 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 SHDQ96IW2 340 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 TWNKQ96RR1 684 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 FAM83CQ9BQN1 747 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 OSBPL6Q9BZF3 934 aa12.89□□□□□ -0.35
HDLBP-239ENST00000483086 RBM12Q9NTZ6 932 aaKnown RBP12.89□□□□□ -0.35
HDLBP-239ENST00000483086 MAGEC2Q9UBF1 373 aaPredicted RBP12.89□□□□□ -0.35
HDLBP-239ENST00000483086 A8MXQ7 604 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 CALUO43852 315 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-239ENST00000483086 GFRA3O60609 400 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 BEST1O76090 585 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 FGF19O95750 216 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 ASS1P00966 412 aaKnown RBP12.88□□□□□ -0.35
HDLBP-239ENST00000483086 HLA-DRAP01903 254 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 CHRNB1P11230 501 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 TDGF1P13385 188 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 ARSAP15289 507 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 CD44P16070 742 aaKnown RBP12.88□□□□□ -0.35
HDLBP-239ENST00000483086 BMP6P22004 513 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 ATICP31939 592 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 PRCPP42785 496 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 GCLMP48507 274 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 PGFP49763 221 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 RPL10AP62906 217 aaKnown RBP12.88□□□□□ -0.35
HDLBP-239ENST00000483086 TNNC1P63316 161 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 NUCB2P80303 420 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 MTAPQ13126 283 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 TRPC3Q13507 836 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 BECN1Q14457 450 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 ARHGAP15Q53QZ3 475 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 ZNF852Q6ZMS4 543 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 Q6ZS52 159 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 ARL14EPQ8N8R7 260 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-239ENST00000483086 B3GALNT2Q8NCR0 500 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 ZMIZ2Q8NF64 920 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 BPIFB1Q8TDL5 484 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 TAS1R2Q8TE23 839 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 FAM3CQ92520 227 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 SEMA4DQ92854 862 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
HDLBP-239ENST00000483086 SPATA17Q96L03 361 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 KCNK16Q96T55 309 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 BCO2Q9BYV7 579 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 SNX25Q9H3E2 840 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 OBP2AQ9NY56 170 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
HDLBP-239ENST00000483086 TRIM49BA6NDI0 452 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 ANTXRLA6NF34 631 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 SPECC1L-ADORA2AF8WAN1 911 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 PHACTR2O75167 634 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 FAM163BP0C2L3 166 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 CTHP32929 405 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 GRIK1P39086 918 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 VAMP7P51809 220 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 ZNF77Q15935 545 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 TAF12Q16514 161 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 ZNF667Q5HYK9 610 aa12.87□□□□□ -0.35
HDLBP-239ENST00000483086 PKN3Q6P5Z2 889 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms