RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ASS1P00966 412 aaKnown RBP14.79□□□□□ -0.04
VARS-225ENST00000482996 TRIM21P19474 475 aaKnown RBP14.79□□□□□ -0.04
VARS-225ENST00000482996 GTF2H1P32780 548 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 PPP1R2P41236 205 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 RAP1GAPP47736 663 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 UBXN2BQ14CS0 331 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 ARHGAP29Q52LW3 1261 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 ZNF852Q6ZMS4 543 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 MON1AQ86VX9 555 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 GPIHBP1Q8IV16 184 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 CMTM8Q8IZV2 173 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 CELF5Q8N6W0 485 aaKnown RBP14.79□□□□□ -0.04
VARS-225ENST00000482996 MAB21L3Q8N8X9 362 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 CSGALNACT1Q8TDX6 532 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 ATOH1Q92858 354 aaPredicted RBP14.79□□□□□ -0.04
VARS-225ENST00000482996 RSPRY1Q96DX4 576 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 NELL2Q99435 816 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 SLC46A2Q9BY10 475 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 OSBPL6Q9BZF3 934 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 DPEP3Q9H4B8 488 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 MMRN2Q9H8L6 949 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 TMEM8AQ9HCN3 771 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 THG1LQ9NWX6 298 aaKnown RBP14.79□□□□□ -0.04
VARS-225ENST00000482996 NME7Q9Y5B8 376 aa14.79□□□□□ -0.04
VARS-225ENST00000482996 FAM170BA6NMN3 283 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 H0Y858 1186 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 NCAM2O15394 837 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 SLC16A3O15427 465 aaKnown RBP14.78□□□□□ -0.04
VARS-225ENST00000482996 PRAMEF12O95522 483 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 DCNP07585 359 aaKnown RBP14.78□□□□□ -0.04
VARS-225ENST00000482996 FKBP3Q00688 224 aaKnown RBP14.78□□□□□ -0.04
VARS-225ENST00000482996 PLCB2Q00722 1185 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 LRRC63Q05C16 580 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 PPP3CAQ08209 521 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 FCHO2Q0JRZ9 810 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 KRT39Q6A163 491 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 TXNDC8Q6A555 127 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 DENND5BQ6ZUT9 1274 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 TMEM150AQ86TG1 271 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 ADSSL1Q8N142 457 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 BPIFB1Q8TDL5 484 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 TAS1R2Q8TE23 839 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 EEF2KMTQ96G04 330 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 DHTKD1Q96HY7 919 aaPredicted RBP14.78□□□□□ -0.04
VARS-225ENST00000482996 C8orf48Q96LL4 319 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 MED10Q9BTT4 135 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 DNAI2Q9GZS0 605 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 KIF9Q9HAQ2 790 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 LTB4R2Q9NPC1 389 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 MAN1B1Q9UKM7 699 aa14.78□□□□□ -0.04
VARS-225ENST00000482996 NCANO14594 1321 aa14.77□□□□□ -0.04
VARS-225ENST00000482996 F8VP50 259 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 GLULP15104 373 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 CD72P21854 359 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 CCNE1P24864 410 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 MAGEA9P43362 315 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 MXI1P50539 228 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 NOP14P78316 857 aaKnown RBP14.77□□□□□ -0.05
VARS-225ENST00000482996 ANKRD40Q6AI12 368 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 SPOPLQ6IQ16 392 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 UNC93AQ86WB7 457 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 ELMO3Q96BJ8 720 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 MSANTD3Q96H12 275 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 B3GNT5Q9BYG0 378 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 BCO2Q9BYV7 579 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 ZNF518BQ9C0D4 1074 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 SDCBP2Q9H190 292 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 CYP3A43Q9HB55 503 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 TRPC7Q9HCX4 862 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.77□□□□□ -0.057e-6■■■■■ 74.5
VARS-225ENST00000482996 PIAS3Q9Y6X2 628 aa14.77□□□□□ -0.05
VARS-225ENST00000482996 TRAV19A0A0A6YYK7 116 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 CLDN5O00501 218 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 TADA3O75528 432 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 USP17L7P0C7H9 530 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 ASPAP45381 313 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 PDE6CP51160 858 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 KPNA1P52294 538 aaPredicted RBP14.76□□□□□ -0.05
VARS-225ENST00000482996 NDST1P52848 882 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 MLLT6P55198 1093 aaPredicted RBP14.76□□□□□ -0.05
VARS-225ENST00000482996 MCCD1P59942 119 aaPredicted RBP14.76□□□□□ -0.05
VARS-225ENST00000482996 UBE2HP62256 183 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 ZNF268Q14587 947 aaPredicted RBP14.76□□□□□ -0.05
VARS-225ENST00000482996 ANGPT1Q15389 498 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 TCERG1LQ5VWI1 586 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 ISM2Q6H9L7 571 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 C1orf228Q6PIY5 440 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 ACOT1Q86TX2 421 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 FAM35AQ86V20 835 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 ZC3H3Q8IXZ2 948 aaKnown RBP14.76□□□□□ -0.05
VARS-225ENST00000482996 FBXL13Q8NEE6 735 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 LRRC3BQ96PB8 259 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 TTLL2Q9BWV7 592 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 NIF3L1Q9GZT8 377 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 SMG9Q9H0W8 520 aaKnown RBP14.76□□□□□ -0.05
VARS-225ENST00000482996 C8orf33Q9H7E9 229 aaPredicted RBP14.76□□□□□ -0.05
VARS-225ENST00000482996 TDP1Q9NUW8 608 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 TRPM5Q9NZQ8 1165 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 DLGAP2Q9P1A6 1054 aa14.76□□□□□ -0.05
VARS-225ENST00000482996 NUP210Q8TEM1 1887 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms