RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 TRAPPC11Q7Z392 1133 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 SPATA2LQ8IUW3 424 aaPredicted RBP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 C12orf56Q8IXR9 622 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 FUBP3Q96I24 572 aaKnown RBP eCLIP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 SPATA32Q96LK8 384 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 CGRRF1Q99675 332 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 USB1Q9BQ65 265 aaKnown RBP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 C8orf33Q9H7E9 229 aaPredicted RBP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 UXTQ9UBK9 157 aaPredicted RBP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 FBXO4Q9UKT5 387 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 PIAS3Q9Y6X2 628 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 DMDP11532 3685 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 COL4A3Q01955 1670 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 NUP210Q8TEM1 1887 aaPredicted RBP13.7□□□□□ -0.22
COL21A1-209ENST00000482933 MYL1P05976 194 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 CDR1P51861 262 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 CYP4F8P98187 520 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 CYP24A1Q07973 514 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 MAPRE1Q15691 268 aaKnown RBP13.7□□□□□ -0.22
COL21A1-209ENST00000482933 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 SCARA3Q6AZY7 606 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 C4orf50Q6ZRC1 276 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 OSTM1Q86WC4 334 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 BPIFB1Q8TDL5 484 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 PAGE5Q96GU1 130 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 FAM84AQ96KN4 292 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 PKMYT1Q99640 499 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 IER2Q9BTL4 223 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 EXOC1Q9NV70 894 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 GTF3C4Q9UKN8 822 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 CDH9Q9ULB4 789 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 NDRG2Q9UN36 371 aaKnown RBP13.7□□□□□ -0.22
COL21A1-209ENST00000482933 NCANO14594 1321 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 PTPRJQ12913 1337 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 TICRRQ7Z2Z1 1910 aa13.7□□□□□ -0.22
COL21A1-209ENST00000482933 SHISA7A6NL88 538 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 ARNTLO00327 626 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 EXOC3O60645 756 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 LMNAP02545 664 aaKnown RBP13.69□□□□□ -0.22
COL21A1-209ENST00000482933 F11P03951 625 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 FAM163BP0C2L3 166 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 PFKFB1P16118 471 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 HMGA1P17096 107 aaKnown RBP13.69□□□□□ -0.22
COL21A1-209ENST00000482933 CYP2F1P24903 491 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 AVPR1AP37288 418 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 NLRP12P59046 1061 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 TRPC3Q13507 836 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 ZNF787Q6DD87 383 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 FAM171BQ6P995 826 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 LIMS2Q7Z4I7 341 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 GRAMD1CQ8IYS0 662 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 CELF5Q8N6W0 485 aaKnown RBP13.69□□□□□ -0.22
COL21A1-209ENST00000482933 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
COL21A1-209ENST00000482933 CCDC127Q96BQ5 260 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 RSPRY1Q96DX4 576 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 MMS19Q96T76 1030 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 SYT15Q9BQS2 421 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 SLC46A2Q9BY10 475 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 THG1LQ9NWX6 298 aaKnown RBP13.69□□□□□ -0.22
COL21A1-209ENST00000482933 MAGEC2Q9UBF1 373 aaPredicted RBP13.69□□□□□ -0.22
COL21A1-209ENST00000482933 MAGED2Q9UNF1 606 aaPredicted RBP13.69□□□□□ -0.22
COL21A1-209ENST00000482933 R4GN57 208 aa13.69□□□□□ -0.22
COL21A1-209ENST00000482933 COL4A2P08572 1712 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 A0A1B0GVL5 298 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 MYBPHLA2RUH7 354 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 KLRC4O43908 158 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 CST3P01034 146 aaPredicted RBP13.68□□□□□ -0.22
COL21A1-209ENST00000482933 WARSP23381 471 aaKnown RBP13.68□□□□□ -0.22
COL21A1-209ENST00000482933 CCNE1P24864 410 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 GPR15P49685 360 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 KPNA1P52294 538 aaPredicted RBP13.68□□□□□ -0.22
COL21A1-209ENST00000482933 AP3M2P53677 418 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 TNNC1P63316 161 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 FOXC1Q12948 553 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 FZD5Q13467 585 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 PPP2R5DQ14738 602 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 DDR2Q16832 855 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 MAML2Q8IZL2 1156 aaPredicted RBP13.68□□□□□ -0.22
COL21A1-209ENST00000482933 CMTM8Q8IZV2 173 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 ADSSL1Q8N142 457 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 KBTBD7Q8WVZ9 684 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 CCDC47Q96A33 483 aaKnown RBP13.68□□□□□ -0.22
COL21A1-209ENST00000482933 CHRDQ9H2X0 955 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 LMAN1LQ9HAT1 526 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 HPSEQ9Y251 543 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 PATJQ8NI35 1801 aa13.68□□□□□ -0.22
COL21A1-209ENST00000482933 TACC1O75410 805 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 NOL4O94818 638 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 KIF20AO95235 890 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 STAU1O95793 577 aaKnown RBP13.67□□□□□ -0.22
COL21A1-209ENST00000482933 LMO2P25791 158 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 ATICP31939 592 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 MAGEA11P43364 429 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 SYKP43405 635 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 CSTF1Q05048 431 aaKnown RBP13.67□□□□□ -0.22
COL21A1-209ENST00000482933 STK4Q13043 487 aa13.67□□□□□ -0.22
COL21A1-209ENST00000482933 SDHAF4Q5VUM1 108 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms