RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 AGRPO00253 132 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 MAP2K7O14733 419 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 AKAP3O75969 853 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 PRPF6O94906 941 aaKnown RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 SNUPNO95149 360 aaKnown RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 ATP1A1P05023 1023 aaKnown RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 MYBP10242 640 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 PLS3P13797 630 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 POU3F2P20265 443 aaPredicted RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 PON1P27169 355 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 CCND2P30279 289 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 RENBPP51606 427 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 BACE1P56817 501 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 PSMC5P62195 406 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 PDE1CQ14123 709 aaPredicted RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 CTTNQ14247 550 aaKnown RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 LONRF1Q17RB8 773 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 NBPF9Q3BBW0 867 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 HSP90B2PQ58FF3 399 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 BEND6Q5SZJ8 279 aaPredicted RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 GPR158Q5T848 1215 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 PKN3Q6P5Z2 889 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 OGFOD3Q6PK18 319 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 VHLLQ6RSH7 139 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 SEZ6L2Q6UXD5 910 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 SCYL3Q8IZE3 742 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 SYCP3Q8IZU3 236 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 LRRN4CLQ8ND94 238 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 CYP2W1Q8TAV3 490 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 SYTL5Q8TDW5 730 aaPredicted RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 TMEM40Q8WWA1 233 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 CLEC4DQ8WXI8 215 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 USP7Q93009 1102 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 SLC35C1Q96A29 364 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 BORCS6Q96GS4 357 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 TEPSINQ96N21 525 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 STRA6Q9BX79 667 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 STK33Q9BYT3 514 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 MED4Q9NPJ6 270 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 DIS3Q9Y2L1 958 aaKnown RBP8.27□□□□□ -1.09
SNX13-208ENST00000482558 PCDHGC5Q9Y5F6 944 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 SNCAIPQ9Y6H5 919 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 EP400Q96L91 3159 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 PRSS47A8MTI9 375 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 DCDC2CA8MYV0 355 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 FZD9O00144 591 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 ZNF263O14978 683 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 KIAA0391O15091 583 aaKnown RBP8.26□□□□□ -1.09
SNX13-208ENST00000482558 EPHB6O15197 1021 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 TGFB1I1O43294 461 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 CHMP2AO43633 222 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 GRIN3BO60391 1043 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 TBC1D8O95759 1140 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 ARP10275 920 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 ALAS1P13196 640 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 VCAM1P19320 739 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 RAB6AP20340 208 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 RRM1P23921 792 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 TNFRSF8P28908 595 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 CYP2C19P33261 490 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 HOXD13P35453 343 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 CASP5P51878 434 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 NAP1L1P55209 391 aaKnown RBP8.26□□□□□ -1.09
SNX13-208ENST00000482558 JAM2P57087 298 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 RTP1P59025 263 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 ID3Q02535 119 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 DMTNQ08495 405 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 GTF2H3Q13889 308 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 INPP5AQ14642 412 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 GRM3Q14832 879 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 GNPTABQ3T906 1256 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 SUPT20HL1Q3ZLR7 823 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 ARHGEF16Q5VV41 709 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 TCERG1LQ5VWI1 586 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 MZT2AQ6P582 158 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 ZNF574Q6ZN55 896 aaPredicted RBP8.26□□□□□ -1.09
SNX13-208ENST00000482558 RNF207Q6ZRF8 634 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 IRF2BP2Q7Z5L9 587 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 SPRED2Q7Z698 418 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 EIF1ADQ8N9N8 165 aaKnown RBP8.26□□□□□ -1.09
SNX13-208ENST00000482558 NSUN6Q8TEA1 469 aaKnown RBP8.26□□□□□ -1.09
SNX13-208ENST00000482558 PIGOQ8TEQ8 1089 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 COG1Q8WTW3 980 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 TAF4BQ92750 862 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 KIFAP3Q92845 792 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 KCNN1Q92952 543 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 ATP6V0A1Q93050 837 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 PBKQ96KB5 322 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 OSBPL9Q96SU4 736 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.26□□□□□ -1.09
SNX13-208ENST00000482558 FUT8Q9BYC5 575 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 UBXN6Q9BZV1 441 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 AGPAT3Q9NRZ7 376 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 HOXC10Q9NYD6 342 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 GCNT4Q9P109 453 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 L1RE1Q9UN81 338 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 DMTF1Q9Y222 760 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 PCDHB14Q9Y5E9 798 aa8.26□□□□□ -1.09
SNX13-208ENST00000482558 NFASCO94856 1347 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms