RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 UXTQ9UBK9 157 aaPredicted RBP19.85■□□□□ 0.77
CLK1-211ENST00000481641 SMG5Q9UPR3 1016 aaKnown RBP19.85■□□□□ 0.77
CLK1-211ENST00000481641 GREB1Q4ZG55 1949 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 ANAPC1Q9H1A4 1944 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 ATG2BQ96BY7 2078 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 EXOC3O60645 756 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 SLFN14P0C7P3 912 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 GNL1P36915 607 aaPredicted RBP19.84■□□□□ 0.77
CLK1-211ENST00000481641 GRIK1P39086 918 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 MAGEA11P43364 429 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 MYL6P60660 151 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 SNRPFP62306 86 aaKnown RBP19.84■□□□□ 0.77
CLK1-211ENST00000481641 RUNX3Q13761 415 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 LPAL2Q16609 132 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 MDH1BQ5I0G3 518 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 C1orf228Q6PIY5 440 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 C4orf50Q6ZRC1 276 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 SPEM1Q8N4L4 309 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 KIAA0895Q8NCT3 520 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 OR6B3Q8NGW1 331 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 CHFRQ96EP1 664 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 IER2Q9BTL4 223 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 EPC1Q9H2F5 836 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 SNX25Q9H3E2 840 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 DPEP3Q9H4B8 488 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 NCDNQ9UBB6 729 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 ZMYM5Q9UJ78 669 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 ZDHHC9Q9Y397 364 aa19.84■□□□□ 0.77
CLK1-211ENST00000481641 PTPRDP23468 1912 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 C2orf78A6NCI8 922 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 USP46P62068 366 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 CCINQ13939 588 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 WDR72Q3MJ13 1102 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 KMT5BQ4FZB7 885 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 DGKKQ5KSL6 1271 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 C12orf56Q8IXR9 622 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 ARL14EPQ8N8R7 260 aaPredicted RBP19.83■□□□□ 0.77
CLK1-211ENST00000481641 RMDN1Q96DB5 314 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 PCED1BQ96HM7 432 aa19.83■□□□□ 0.77
CLK1-211ENST00000481641 FAM126AQ9BYI3 521 aaPredicted RBP19.83■□□□□ 0.77
CLK1-211ENST00000481641 NXF1Q9UBU9 619 aaKnown RBP19.83■□□□□ 0.77
CLK1-211ENST00000481641 CHURC1-FNTBB4DL54 471 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 PFKFB1P16118 471 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 FNTBP49356 437 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 NRLP54845 237 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 TNNC1P63316 161 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 TRPC3Q13507 836 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 PPP2R5DQ14738 602 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 NAIF1Q69YI7 327 aaPredicted RBP19.82■□□□□ 0.76
CLK1-211ENST00000481641 HEATR6Q6AI08 1181 aaKnown RBP19.82■□□□□ 0.76
CLK1-211ENST00000481641 PKN3Q6P5Z2 889 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 MYCBPAPQ8TBZ2 947 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 KIF9Q9HAQ2 790 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 EXOC1Q9NV70 894 aa19.82■□□□□ 0.76
CLK1-211ENST00000481641 CEP250Q9BV73 2442 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 TRAV19A0A0A6YYK7 116 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 SOBPA7XYQ1 873 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 K7ESF4 209 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 PHACTR2O75167 634 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 TACC1O75410 805 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 CKMP06732 381 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 CACNA2D1P54289 1103 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 FAM160A1Q05DH4 1040 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 SRSF5Q13243 272 aaKnown RBP19.81■□□□□ 0.76
CLK1-211ENST00000481641 ZNF268Q14587 947 aaPredicted RBP19.81■□□□□ 0.76
CLK1-211ENST00000481641 MTF1Q14872 753 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 MAPRE1Q15691 268 aaKnown RBP19.81■□□□□ 0.76
CLK1-211ENST00000481641 TDRD10Q5VZ19 366 aaKnown RBP19.81■□□□□ 0.76
CLK1-211ENST00000481641 FSTL4Q6MZW2 842 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 CC2D1AQ6P1N0 951 aaPredicted RBP19.81■□□□□ 0.76
CLK1-211ENST00000481641 VSTM1Q6UX27 236 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 SPATA17Q96L03 361 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 XYLT2Q9H1B5 865 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 FBRSL1Q9HCM7 1045 aaKnown RBP19.81■□□□□ 0.76
CLK1-211ENST00000481641 TMEM30AQ9NV96 361 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 GCNT4Q9P109 453 aa19.81■□□□□ 0.76
CLK1-211ENST00000481641 CGNQ9P2M7 1197 aaKnown RBP19.81■□□□□ 0.76
CLK1-211ENST00000481641 LRRIQ3A6PVS8 624 aaPredicted RBP19.8■□□□□ 0.76
CLK1-211ENST00000481641 F8VP50 259 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 CLDN5O00501 218 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 USP17L7P0C7H9 530 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 PTPN1P18031 435 aaKnown RBP19.8■□□□□ 0.76
CLK1-211ENST00000481641 CMA1P23946 247 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 RAP1GAPP47736 663 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 CDH8P55286 799 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 BIRC3Q13489 604 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 ZNF77Q15935 545 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 FSIP1Q8NA03 581 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 SPATA32Q96LK8 384 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 SMYD3Q9H7B4 428 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 DMAC2Q9NW81 257 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 WNT6Q9Y6F9 365 aa19.8■□□□□ 0.76
CLK1-211ENST00000481641 A8MXQ7 604 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 HRO43593 1189 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 CLSTN1O94985 981 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 PRR29P0C7W0 189 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 HDCP19113 662 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 ANXA13P27216 316 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 DLG4P78352 724 aa19.79■□□□□ 0.76
CLK1-211ENST00000481641 USP4Q13107 963 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms