RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 SYCE3A1L190 88 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 A8MXQ7 604 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 MOSPD3O75425 235 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 GNA14O95837 355 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 LRG1P02750 347 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 AFPP02771 609 aaKnown RBP11.28□□□□□ -0.6
SSBP1-210ENST00000481508 RHOP08100 348 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 POU2F2P09086 479 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 FAM163BP0C2L3 166 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 CCDC192P0DO97 292 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 GJA1P17302 382 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 PTPN1P18031 435 aaKnown RBP11.28□□□□□ -0.6
SSBP1-210ENST00000481508 CD58P19256 250 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 PCSK1P29120 753 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 MTMR3Q13615 1198 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 NCAPHQ15003 741 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 DDR2Q16832 855 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 MIIPQ5JXC2 388 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 PRSS36Q5K4E3 855 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 CDKAL1Q5VV42 579 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 PAQR9Q6ZVX9 377 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 GET4Q7L5D6 327 aaPredicted RBP11.28□□□□□ -0.6
SSBP1-210ENST00000481508 ACOT1Q86TX2 421 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 TMC8Q8IU68 726 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 UBR7Q8N806 425 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 ENOX1Q8TC92 643 aaKnown RBP11.28□□□□□ -0.6
SSBP1-210ENST00000481508 GIPC2Q8TF65 315 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 ING5Q8WYH8 240 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 TCEAL4Q96EI5 215 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 PCED1BQ96HM7 432 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 NECTIN4Q96NY8 510 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 CORO1BQ9BR76 489 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 B3GNT5Q9BYG0 378 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 ZNF518BQ9C0D4 1074 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 DPP7Q9UHL4 492 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
SSBP1-210ENST00000481508 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
SSBP1-210ENST00000481508 NUP210Q8TEM1 1887 aaPredicted RBP11.27□□□□□ -0.6
SSBP1-210ENST00000481508 KCNJ18B7U540 433 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 PMM2O15305 246 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 XYLBO75191 536 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CILPO75339 1184 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CALCAP01258 141 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CCDC130P13994 396 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CEBPBP17676 345 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 BDNFP23560 247 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 FSHRP23945 695 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 MTIF2P46199 727 aaKnown RBP11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CYP27A1Q02318 531 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 KCNJ12Q14500 433 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 TPD52L1Q16890 204 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-210ENST00000481508 ANO6Q4KMQ2 910 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 GJB7Q6PEY0 223 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 ELMSAN1Q6PJG2 1045 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CYP26C1Q6V0L0 522 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 FBXL6Q8N531 539 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 MYCBPAPQ8TBZ2 947 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 SPPL2BQ8TCT7 592 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CNTNAP3BQ96NU0 1288 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CRACR2AQ9BSW2 395 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 CNTNAP3Q9BZ76 1288 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 INTS2Q9H0H0 1204 aaKnown RBP11.27□□□□□ -0.61
SSBP1-210ENST00000481508 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 FANCLQ9NW38 375 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 TAB2Q9NYJ8 693 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 AJAP1Q9UKB5 411 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-210ENST00000481508 MAFFQ9ULX9 164 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 FAM50BQ9Y247 325 aa11.27□□□□□ -0.61
SSBP1-210ENST00000481508 HELZP42694 1942 aaKnown RBP11.27□□□□□ -0.61
SSBP1-210ENST00000481508 FGFR1OPO95684 399 aaKnown RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 PDGFBP01127 241 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 HMGA1P17096 107 aaKnown RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 SLC9A1P19634 815 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 CUL2Q13617 745 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 NFKBIBQ15653 356 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 NFE2Q16621 373 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 CFAP221Q4G0U5 840 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 PABPC1LQ4VXU2 614 aaKnown RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 CT47A1Q5JQC4 288 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 PHLDB3Q6NSJ2 640 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 DPY19L2P1Q6NXN4 242 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 RRAGAQ7L523 313 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 BMP8AQ7Z5Y6 402 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 DNAJB7Q7Z6W7 309 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 FAM35AQ86V20 835 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 SPATA2LQ8IUW3 424 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 SCN4BQ8IWT1 228 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 NPAS3Q8IXF0 933 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 FUKQ8N0W3 1084 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 AOPEPQ8N6M6 819 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 C12orf29Q8N999 325 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 TDRD5Q8NAT2 981 aaKnown RBP11.26□□□□□ -0.61
SSBP1-210ENST00000481508 EHBP1Q8NDI1 1231 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 SHKBP1Q8TBC3 707 aa11.26□□□□□ -0.61
SSBP1-210ENST00000481508 C2orf15Q8WU43 125 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms