RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 JADE3Q92613 823 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 SYMPKQ92797 1274 aaKnown RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 ZUFSPQ96AP4 578 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 VPS33AQ96AX1 596 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC39A13Q96H72 371 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 OSBPL8Q9BZF1 889 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 KCNK9Q9NPC2 374 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 RIC8BQ9NVN3 520 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 KCTD5Q9NXV2 234 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 TMOD2Q9NZR1 351 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 RNF103O00237 685 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 KCNK3O14649 394 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 MSI1O43347 362 aaKnown RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 USP1O94782 785 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 PLEKP08567 350 aaPredicted RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 PLCG1P19174 1290 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 LTKP29376 864 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 HSPA13P48723 471 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC9A3P48764 834 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 MAPKAPK2P49137 400 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 ETV1P50549 477 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 TPTEP56180 551 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 TMPRSS15P98073 1019 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 BTKQ06187 659 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 DNAL1Q4LDG9 190 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 OGFRL1Q5TC84 451 aaPredicted RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 FAM205BPQ63HN1 556 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 OTOP3Q7RTS5 596 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 PROSER2Q86WR7 435 aaPredicted RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 AFAP1L2Q8N4X5 818 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 ZNF420Q8TAQ5 688 aaPredicted RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC2A14Q8TDB8 520 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 PSPC1Q8WXF1 523 aaKnown RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 PMEPA1Q969W9 287 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 TXNDC15Q96J42 360 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 MAP6Q96JE9 813 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 TRIM47Q96LD4 638 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 LIN28AQ9H9Z2 209 aaKnown RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 SUCOQ9UBS9 1254 aaKnown RBP10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 LGALS13Q9UHV8 139 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC45A1Q9Y2W3 748 aa10.8□□□□□ -0.68
PRPF4B-206ENST00000481109 ARHGAP23Q9P227 1491 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 COL15A1P39059 1388 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 A6NL46 340 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 A8MX80 341 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 hCG_2039718K7EN88 272 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 HDAC3O15379 428 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 FGAP02671 866 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 TRIM23P36406 574 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 BTDP43251 543 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 BMXP51813 675 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 RAD51Q06609 339 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 NCOA4Q13772 614 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 DHX34Q14147 1143 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 POU6F1Q14863 301 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 DUSP7Q16829 419 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ZNF568Q3ZCX4 644 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 RRAGBQ5VZM2 374 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 TTI2Q6NXR4 508 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ZDHHC24Q6UX98 284 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 HAUS6Q7Z4H7 955 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 FAM83AQ86UY5 434 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 TMEM126BQ8IUX1 230 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ZSCAN29Q8IWY8 852 aaPredicted RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 NGDNQ8NEJ9 315 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 APPL2Q8NEU8 664 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 LHFPL5Q8TAF8 219 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 C7orf43Q8WVR3 580 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ANKS1AQ92625 1134 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 TTC25Q96NG3 672 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 CYTH2Q99418 400 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 DOK1Q99704 481 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 TRIM15Q9C019 465 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 IGSF5Q9NSI5 407 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 GDAP2Q9NXN4 497 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ZC3H7BQ9UGR2 993 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SOX13Q9UN79 622 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC8A2Q9UPR5 921 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SMCO2A6NFE2 343 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 EVPLLA8MZ36 301 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 H3BUI4 141 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SNPHO15079 494 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ITGAXP20702 1163 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 RPA1P27694 616 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 PRKAR1BP31321 381 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 CDK16Q00536 496 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 FKBP4Q02790 459 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 PDK4Q16654 411 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 RNASEH2BQ5TBB1 312 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 C2CD5Q86YS7 1000 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SMYD4Q8IYR2 804 aaPredicted RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ASCC1Q8N9N2 400 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SIMC1Q8NDZ2 872 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC22A8Q8TCC7 542 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ISOC1Q96CN7 298 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 RBM14Q96PK6 669 aaKnown RBP10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 ALPK1Q96QP1 1244 aa10.79□□□□□ -0.68
PRPF4B-206ENST00000481109 SLC29A1Q99808 456 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms