RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SAMD11Q96NU1 681 aa7.87□□□□□ -1.15
CBX3-206ENST00000481057 TCF7L1Q9HCS4 588 aa7.87□□□□□ -1.15
CBX3-206ENST00000481057 FAM171A2A8MVW0 826 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 AKAP10O43572 662 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 GASTP01350 101 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 ZKSCAN1P17029 563 aaPredicted RBP7.86□□□□□ -1.15
CBX3-206ENST00000481057 MSX2P35548 267 aaPredicted RBP7.86□□□□□ -1.15
CBX3-206ENST00000481057 ATXN1P54253 815 aaKnown RBP7.86□□□□□ -1.15
CBX3-206ENST00000481057 PPIGQ13427 754 aaKnown RBP eCLIP7.86□□□□□ -1.156e-10■□□□□ 9.5
CBX3-206ENST00000481057 TNFAIP1Q13829 316 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 SEPT2Q15019 361 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 TTLL5Q6EMB2 1281 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 FAM111BQ6SJ93 734 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 RAVER1Q8IY67 606 aaKnown RBP7.86□□□□□ -1.15
CBX3-206ENST00000481057 SLC44A5Q8NCS7 719 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 OR2I1PQ8NGU4 316 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 Q8TCH9 128 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 LOXL4Q96JB6 756 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 CD248Q9HCU0 757 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 DDX20Q9UHI6 824 aaKnown RBP7.86□□□□□ -1.15
CBX3-206ENST00000481057 ECM29Q5VYK3 1845 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 FRYQ5TBA9 3013 aa7.86□□□□□ -1.15
CBX3-206ENST00000481057 ANKRD17O75179 2603 aaKnown RBP7.85□□□□□ -1.15
CBX3-206ENST00000481057 E2F8A0AVK6 867 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 ADCY6O43306 1168 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 STC2O76061 302 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 FAM110CQ1W6H9 321 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 PSRC1Q6PGN9 363 aaPredicted RBP7.85□□□□□ -1.15
CBX3-206ENST00000481057 TTC9BQ8N6N2 239 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 OR7D4Q8NG98 312 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 KCNG4Q8TDN1 519 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 ARNTL2Q8WYA1 636 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 ARL8AQ96BM9 186 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 IL17RAQ96F46 866 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 TMEM39BQ9GZU3 492 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 SAP30BPQ9UHR5 308 aaKnown RBP7.85□□□□□ -1.15
CBX3-206ENST00000481057 SERPINB13Q9UIV8 391 aa7.85□□□□□ -1.15
CBX3-206ENST00000481057 KBTBD13C9JR72 458 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 H3BQ06 376 aaPredicted RBP7.84□□□□□ -1.15
CBX3-206ENST00000481057 ZNF623O75123 536 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 ENDOD1O94919 500 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 TIMP1P01033 207 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 GZMKP49863 264 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 RAB27AP51159 221 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 RPS8P62241 208 aaKnown RBP7.84□□□□□ -1.15
CBX3-206ENST00000481057 ZXDAP98168 799 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 MRPL49Q13405 166 aaKnown RBP7.84□□□□□ -1.15
CBX3-206ENST00000481057 MTHFSDQ2M296 383 aaKnown RBP7.84□□□□□ -1.15
CBX3-206ENST00000481057 PRAMEF14Q5SWL7 426 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 MFSD5Q6N075 450 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 TRMT2AQ8IZ69 625 aaKnown RBP7.84□□□□□ -1.15
CBX3-206ENST00000481057 ZNF512Q96ME7 567 aaPredicted RBP7.84□□□□□ -1.15
CBX3-206ENST00000481057 WWC2-AS2Q96NR7 200 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 CDC5LQ99459 802 aaKnown RBP7.84□□□□□ -1.15
CBX3-206ENST00000481057 RHOBTB2Q9BYZ6 727 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 IP6K2Q9UHH9 426 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 INTUQ9ULD6 942 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 FAM50BQ9Y247 325 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 GIT1Q9Y2X7 761 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 SH3BP1Q9Y3L3 701 aa7.84□□□□□ -1.15
CBX3-206ENST00000481057 COL4A3Q01955 1670 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 PLXNB2O15031 1838 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 BTBD11A6QL63 1104 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 LPXNO60711 386 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 PQBP1O60828 265 aaKnown RBP7.83□□□□□ -1.16
CBX3-206ENST00000481057 CA3P07451 260 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 CSF2RAP15509 400 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 COMTP21964 271 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 SREBF1P36956 1147 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 SLC6A9P48067 706 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 CCL14Q16627 93 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 FAM214AQ32MH5 1076 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 FKBP15Q5T1M5 1219 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 LCE4AQ5TA78 99 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 D2HGDHQ8N465 521 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 IL17REQ8NFR9 667 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 MDM1Q8TC05 714 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 NEK9Q8TD19 979 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 HSPBAP1Q96EW2 488 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 BORCS6Q96GS4 357 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 CDH19Q9H159 772 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 CSRNP2Q9H175 543 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 MTIF3Q9H2K0 278 aaKnown RBP7.83□□□□□ -1.16
CBX3-206ENST00000481057 ST6GALNAC2Q9UJ37 374 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 LIMCH1Q9UPQ0 1083 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 SIK3Q9Y2K2 1263 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 IPPQ9Y573 584 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 MYO18BQ8IUG5 2567 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 FRYLO94915 3013 aa7.83□□□□□ -1.16
CBX3-206ENST00000481057 TAF4O00268 1085 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 HTRA2O43464 458 aaPredicted RBP7.82□□□□□ -1.16
CBX3-206ENST00000481057 LMNAP02545 664 aaKnown RBP7.82□□□□□ -1.16
CBX3-206ENST00000481057 EDNRBP24530 442 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 ZEB1P37275 1124 aaPredicted RBP7.82□□□□□ -1.16
CBX3-206ENST00000481057 APBA1Q02410 837 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 SIGLEC14Q08ET2 396 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 UAP1L1Q3KQV9 507 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 Q6ZSN1 163 aa7.82□□□□□ -1.16
CBX3-206ENST00000481057 PDZD4Q76G19 769 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms