RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 DDX43Q9NXZ2 648 aaKnown RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 TFIP11Q9UBB9 837 aaKnown RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 EBF1Q9UH73 591 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 FBXO2Q9UK22 296 aaPredicted RBP7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ITGA11Q9UKX5 1188 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 CCL26Q9Y258 94 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 FRYQ5TBA9 3013 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 ATRXP46100 2492 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 EML5Q05BV3 1969 aa7.6□□□□□ -1.19
COL17A1-205ENST00000480127 SDK1Q7Z5N4 2213 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 TRAV19A0A0A6YYK7 116 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 SRRM3A6NNA2 597 aaPredicted RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CDX4O14627 284 aaPredicted RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 KIAA0391O15091 583 aaKnown RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 FAM189A1O60320 539 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 RHOBTB1O94844 696 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 F11P03951 625 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 ADRB2P07550 413 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CSH1P0DML2 217 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CSH2P0DML3 217 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CEACAM1P13688 526 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CSRP1P21291 193 aaKnown RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 GARTP22102 1010 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 ACAT1P24752 427 aaKnown RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 GRIK1P39086 918 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 LHX1P48742 406 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 TNNC1P63316 161 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 IFRD2Q12894 506 aaPredicted RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 BIRC3Q13489 604 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CUL4AQ13619 759 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 ACAP1Q15027 740 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 SLC39A14Q15043 492 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 SURF1Q15526 300 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 ELF2Q15723 593 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 DUOXA2Q1HG44 320 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 DAB2IPQ5VWQ8 1189 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 LMBRD2Q68DH5 695 aaPredicted RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 SYT13Q7L8C5 426 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 LRRTM3Q86VH5 581 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 BRSK2Q8IWQ3 736 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 NELFCDQ8IXH7 590 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 TMEM86AQ8N2M4 240 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 RDH13Q8NBN7 331 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 RPLP0P6Q8NHW5 317 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CCDC127Q96BQ5 260 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 INTS4Q96HW7 963 aaKnown RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 HPDLQ96IR7 371 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 USP28Q96RU2 1077 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 SCNM1Q9BWG6 230 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 MTMR12Q9C0I1 747 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 NACA2Q9H009 215 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 ZCWPW1Q9H0M4 648 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CUEDC2Q9H467 287 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 ST6GALNAC4Q9H4F1 302 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 KIAA1586Q9HCI6 787 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 PDE11AQ9HCR9 933 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 OLFML3Q9NRN5 406 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 ZMYM5Q9UJ78 669 aa7.59□□□□□ -1.19
COL17A1-205ENST00000480127 CIZ1Q9ULV3 898 aaPredicted RBP7.59□□□□□ -1.19
COL17A1-205ENST00000480127 SPAG17Q6Q759 2223 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 TMEM8BA6NDV4 472 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 PATE3B3GLJ2 98 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 PIRO00625 290 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 KHNYNO15037 678 aaKnown RBP7.58□□□□□ -1.2
COL17A1-205ENST00000480127 EXOC3O60645 756 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 APBB3O95704 486 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 CYP11A1P05108 521 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 HAPLN1P10915 354 aaPredicted RBP7.58□□□□□ -1.2
COL17A1-205ENST00000480127 PDIA4P13667 645 aaKnown RBP7.58□□□□□ -1.2
COL17A1-205ENST00000480127 HMGA1P17096 107 aaKnown RBP7.58□□□□□ -1.2
COL17A1-205ENST00000480127 DRD1P21728 446 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 DDX6P26196 483 aaKnown RBP eCLIP7.58□□□□□ -1.2
COL17A1-205ENST00000480127 GJA4P35212 333 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 IFNAR2P48551 515 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 PDE6CP51160 858 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 NLRP12P59046 1061 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 KCNA1Q09470 495 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 NR1H3Q13133 447 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 DMC1Q14565 340 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 MAPRE1Q15691 268 aaKnown RBP7.58□□□□□ -1.2
COL17A1-205ENST00000480127 FBXO43Q4G163 708 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 FAM26FQ5R3K3 315 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 SDHAF4Q5VUM1 108 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 PMS2CLQ68D20 193 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 TXNDC8Q6A555 127 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 SLC39A4Q6P5W5 647 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 TTC30AQ86WT1 665 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 EFCAB13Q8IY85 973 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 PDCL2Q8N4E4 241 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 CPA6Q8N4T0 437 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 LRRC52Q8N7C0 313 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 P2RY13Q9BPV8 354 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 CBWD1Q9BRT8 395 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 MED10Q9BTT4 135 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 DNAI2Q9GZS0 605 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 TNMDQ9H2S6 317 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 IKZF4Q9H2S9 585 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 TDP1Q9NUW8 608 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 EXOC1Q9NV70 894 aa7.58□□□□□ -1.2
COL17A1-205ENST00000480127 EHD2Q9NZN4 543 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms