RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 IVDP26440 423 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 PCSK6P29122 969 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 SOX5P35711 763 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 GRM1Q13255 1194 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 DCAF17Q5H9S7 520 aaPredicted RBP11.38□□□□□ -0.59
CHD6-208ENST00000480022 TREML2Q5T2D2 321 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 GADL1Q6ZQY3 521 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 SYDE1Q6ZW31 735 aaPredicted RBP11.38□□□□□ -0.59
CHD6-208ENST00000480022 METTL25Q8N6Q8 603 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 SNX29Q8TEQ0 813 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 MTBPQ96DY7 904 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 DHRS1Q96LJ7 313 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 TMEM120AQ9BXJ8 343 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 WNT8AQ9H1J5 351 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 ARHGEF4Q9NR80 690 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
CHD6-208ENST00000480022 SEPT11Q9NVA2 429 aaKnown RBP11.38□□□□□ -0.59
CHD6-208ENST00000480022 BARHL2Q9NY43 387 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 GCNT4Q9P109 453 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 THEGQ9P2T0 379 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 HBS1LQ9Y450 684 aaKnown RBP11.38□□□□□ -0.59
CHD6-208ENST00000480022 HEY1Q9Y5J3 304 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 FADS3Q9Y5Q0 445 aa11.38□□□□□ -0.59
CHD6-208ENST00000480022 CCL15-CCL14A0A0B4J2E2 113 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 FAM170AA1A519 330 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 FCHO1O14526 889 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 DKC1O60832 514 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHD6-208ENST00000480022 TNFAIP3P21580 790 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 ARHGAP4P98171 946 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 RELAQ04206 551 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 PTK6Q13882 451 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 KIF22Q14807 665 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 CCL15Q16663 113 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 KRT79Q5XKE5 535 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 FASTKD5Q7L8L6 764 aaKnown RBP11.37□□□□□ -0.59
CHD6-208ENST00000480022 TRIM50Q86XT4 487 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 TDRPQ86YL5 185 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 PLEKHO2Q8TD55 490 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 SCFD1Q8WVM8 642 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 BRI3BPQ8WY22 251 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 PHF12Q96QT6 1004 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 RPAP3Q9H6T3 665 aaPredicted RBP11.37□□□□□ -0.59
CHD6-208ENST00000480022 S100A14Q9HCY8 104 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 SLC7A8Q9UHI5 535 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.37□□□□□ -0.59
CHD6-208ENST00000480022 MATN2O00339 956 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 LSM1O15116 133 aaKnown RBP11.37□□□□□ -0.59
CHD6-208ENST00000480022 TYROBPO43914 113 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 ZBED4O75132 1171 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 DLATP10515 647 aaKnown RBP11.37□□□□□ -0.59
CHD6-208ENST00000480022 COMTP21964 271 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 SLC5A2P31639 672 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 FXR2P51116 673 aaKnown RBP eCLIP11.37□□□□□ -0.593e-7■■□□□ 12.3
CHD6-208ENST00000480022 HDAC4P56524 1084 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 PLCB3Q01970 1234 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 MYLK3Q32MK0 819 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 TMEM119Q4V9L6 283 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 ASPRV1Q53RT3 343 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 LPCAT4Q643R3 524 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 THOC7Q6I9Y2 204 aaKnown RBP11.37□□□□□ -0.59
CHD6-208ENST00000480022 TTBK2Q6IQ55 1244 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 PALB2Q86YC2 1186 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 FAM186BQ8IYM0 893 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 CAPNS2Q96L46 248 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 SNX27Q96L92 541 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 ZIC5Q96T25 663 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 THTPAQ9BU02 230 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 MRPS26Q9BYN8 205 aaKnown RBP11.37□□□□□ -0.59
CHD6-208ENST00000480022 RAB34Q9BZG1 259 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 GRIP2Q9C0E4 1043 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 NACA2Q9H009 215 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 TAS2R14Q9NYV8 317 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 PLK2Q9NYY3 685 aa11.37□□□□□ -0.59
CHD6-208ENST00000480022 WDR91A4D1P6 747 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 POC1B-GALNT4F8VUJ3 575 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 GCAP28676 217 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 CCR3P51677 355 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 ORC2Q13416 577 aaPredicted RBP11.36□□□□□ -0.59
CHD6-208ENST00000480022 SEPT7Q16181 437 aaKnown RBP11.36□□□□□ -0.59
CHD6-208ENST00000480022 DNAL1Q4LDG9 190 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 SGO2Q562F6 1265 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 GPATCH4Q5T3I0 446 aaKnown RBP11.36□□□□□ -0.59
CHD6-208ENST00000480022 PACS1Q6VY07 963 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 TTC7BQ86TV6 843 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 RELL1Q8IUW5 271 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 RBM15BQ8NDT2 890 aaKnown RBP11.36□□□□□ -0.59
CHD6-208ENST00000480022 C1orf54Q8WWF1 131 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 VPS50Q96JG6 964 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 CLPTM1LQ96KA5 538 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 CFAP57Q96MR6 1250 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 BTBD9Q96Q07 612 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 EIF2AQ9BY44 585 aaKnown RBP11.36□□□□□ -0.59
CHD6-208ENST00000480022 UTP6Q9NYH9 597 aaKnown RBP11.36□□□□□ -0.59
CHD6-208ENST00000480022 PLA2G4CQ9UP65 541 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 AGTPBP1Q9UPW5 1226 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 LZTS1Q9Y250 596 aa11.36□□□□□ -0.59
CHD6-208ENST00000480022 NEU2Q9Y3R4 380 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms