RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 REEP2Q9BRK0 252 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 DCUN1D5Q9BTE7 237 aa22.18■■□□□ 1.14
SDF4-206ENST00000478938 FHDC1Q9C0D6 1143 aaPredicted RBP22.18■■□□□ 1.14
SDF4-206ENST00000478938 PAIP1Q9H074 479 aaKnown RBP22.18■■□□□ 1.14
SDF4-206ENST00000478938 EML1O00423 815 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 USP17L8P0C7I0 530 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 RALAP11233 206 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 SLC12A3P55017 1021 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 AQP5P55064 265 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 TFDP1Q14186 410 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 USP41Q3LFD5 358 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 CCDC153Q494R4 210 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 STARD8Q92502 1023 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 PAFAH2Q99487 392 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 SHCBP1LQ9BZQ2 653 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 POLIQ9UNA4 740 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 GCNT3O95395 438 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 DHRS4L1P0CG22 281 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 ETS1P14921 441 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 GYG1P46976 350 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 CHSY1Q86X52 802 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 HPS6Q86YV9 775 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 ALLCQ8N6M5 410 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 ETNPPLQ8TBG4 499 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 JADE3Q92613 823 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 RILPQ96NA2 401 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 ACAP3Q96P50 834 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 GBA3Q9H227 469 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 PCDHA12Q9UN75 941 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 POMPQ9Y244 141 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 KDM3AQ9Y4C1 1321 aa22.17■■□□□ 1.14
SDF4-206ENST00000478938 GOLGA8SH3BPF8 625 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 GOLGA8MH3BSY2 632 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 CDH3P22223 829 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 SSTR1P30872 391 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 STAT3P40763 770 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 ETV4P43268 484 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 IRX4P78413 519 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 DEPDC1Q5TB30 811 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 SNRNP48Q6IEG0 339 aaKnown RBP22.16■■□□□ 1.14
SDF4-206ENST00000478938 USP17L2Q6R6M4 530 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 ATP6V0A1Q93050 837 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 TMEM47Q9BQJ4 181 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 MECRQ9BV79 373 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 UBE2TQ9NPD8 197 aaPredicted RBP22.16■■□□□ 1.14
SDF4-206ENST00000478938 RABGEF1Q9UJ41 708 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 STRIP2Q9ULQ0 834 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 RAB26Q9ULW5 256 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 CCDC195A0A1B0GUA6 201 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 WTIPA6NIX2 430 aaPredicted RBP22.16■■□□□ 1.14
SDF4-206ENST00000478938 TMX2-CTNND1H3BSU7 103 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 SGPL1O95470 568 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 PPARGP37231 505 aaPredicted RBP22.16■■□□□ 1.14
SDF4-206ENST00000478938 KCNQ4P56696 695 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 CDKL1Q00532 357 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 MYL7Q01449 175 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 CAMK2BQ13554 666 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 GALNT4Q8N4A0 578 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 COA7Q96BR5 231 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 ITPKCQ96DU7 683 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 WWP1Q9H0M0 922 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 ZNF287Q9HBT7 754 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 CDH22Q9UJ99 828 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 NOX1Q9Y5S8 564 aa22.16■■□□□ 1.14
SDF4-206ENST00000478938 MEIS1O00470 390 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 MED24O75448 989 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 NEK2P51955 445 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 PSMC6P62333 389 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 HYIQ5T013 277 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 CENPUQ71F23 418 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 TRIML2Q8N7C3 387 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 GSDMBQ8TAX9 411 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 HSPH1Q92598 858 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 ZMAT2Q96NC0 199 aaKnown RBP22.15■■□□□ 1.14
SDF4-206ENST00000478938 RANBP9Q96S59 729 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 NDEL1Q9GZM8 345 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 TIMM22Q9Y584 194 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 KCPQ6ZWJ8 1503 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 MTM1Q13496 603 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 COG2Q14746 738 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 CCNG2Q16589 344 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 CES4AQ5XG92 561 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 ARHGEF19Q8IW93 802 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 ACTRT2Q8TDY3 377 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 EBF4Q9BQW3 602 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 MCM9Q9NXL9 1143 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 GNEQ9Y223 722 aaKnown RBP22.15■■□□□ 1.14
SDF4-206ENST00000478938 CLUHO75153 1309 aa22.15■■□□□ 1.14
SDF4-206ENST00000478938 LAMB2P55268 1798 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 GOLGA8TH3BQL2 631 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 DNALI1O14645 258 aaPredicted RBP22.14■■□□□ 1.14
SDF4-206ENST00000478938 TGFB1I1O43294 461 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 ZBTB11O95625 1053 aaPredicted RBP22.14■■□□□ 1.14
SDF4-206ENST00000478938 PROCP04070 461 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 S100A1P23297 94 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 PSMC2P35998 433 aaKnown RBP22.14■■□□□ 1.14
SDF4-206ENST00000478938 SLC1A1P43005 524 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 CENPCQ03188 943 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 INAQ16352 499 aa22.14■■□□□ 1.14
SDF4-206ENST00000478938 UBE2SQ16763 222 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms